Cargando…

Genome-Wide Identification, Characterization, and Expression Analysis Related to Low-Temperature Stress of the CmGLP Gene Family in Cucumis melo L.

Germin-like protein (GLP) participates in plant growth and development and plays an important role in plant stress. In the present study, 22 CmGLPs belonging to five classes were identified in the melon genome. Each member of the CmGLPs family contains a typical Cupin_1 domain. We conducted a genome...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Zhengda, Wen, Yongshuai, Yuan, Luqiao, Zhang, Yuhui, Liu, Jingyi, Zhou, Fan, Wang, Qunning, Hu, Xiaohui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9330424/
https://www.ncbi.nlm.nih.gov/pubmed/35897766
http://dx.doi.org/10.3390/ijms23158190
_version_ 1784758157465092096
author Zhang, Zhengda
Wen, Yongshuai
Yuan, Luqiao
Zhang, Yuhui
Liu, Jingyi
Zhou, Fan
Wang, Qunning
Hu, Xiaohui
author_facet Zhang, Zhengda
Wen, Yongshuai
Yuan, Luqiao
Zhang, Yuhui
Liu, Jingyi
Zhou, Fan
Wang, Qunning
Hu, Xiaohui
author_sort Zhang, Zhengda
collection PubMed
description Germin-like protein (GLP) participates in plant growth and development and plays an important role in plant stress. In the present study, 22 CmGLPs belonging to five classes were identified in the melon genome. Each member of the CmGLPs family contains a typical Cupin_1 domain. We conducted a genome-wide analysis of the melon GLP gene family characterization. CmGLPs were randomly distributed in the melon chromosomes, with the largest number on chromosome 8, having eight family members. Gene duplication events drive the evolution and expansion of the melon GLP gene family. Based on the phylogenetic tree analysis of GLP proteins in melon, rice, Arabidopsis, and cucumber, it was found that the GLP gene families of different species have diverged in evolution. Based on qRT-PCR results, all members of the CmGLP gene family could be expressed in different tissues of melon. Most CmGLP genes were up-regulated after low-temperature stress. The relative expression of CmGLP2-5 increased by 157.13 times at 48 h after low-temperature treatment. This finding suggests that the CmGLP2-5 might play an important role in low-temperature stress in melon. Furthermore, quantitative dual LUC assays indicated that CmMYB23 and CmWRKY33 can bind the promoter fragment of the CmGLP2-5. These results were helpful in understanding the functional succession and evolution of the melon GLP gene family and further revealed the response of CmGLPs to low-temperature stress in melon.
format Online
Article
Text
id pubmed-9330424
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-93304242022-07-29 Genome-Wide Identification, Characterization, and Expression Analysis Related to Low-Temperature Stress of the CmGLP Gene Family in Cucumis melo L. Zhang, Zhengda Wen, Yongshuai Yuan, Luqiao Zhang, Yuhui Liu, Jingyi Zhou, Fan Wang, Qunning Hu, Xiaohui Int J Mol Sci Article Germin-like protein (GLP) participates in plant growth and development and plays an important role in plant stress. In the present study, 22 CmGLPs belonging to five classes were identified in the melon genome. Each member of the CmGLPs family contains a typical Cupin_1 domain. We conducted a genome-wide analysis of the melon GLP gene family characterization. CmGLPs were randomly distributed in the melon chromosomes, with the largest number on chromosome 8, having eight family members. Gene duplication events drive the evolution and expansion of the melon GLP gene family. Based on the phylogenetic tree analysis of GLP proteins in melon, rice, Arabidopsis, and cucumber, it was found that the GLP gene families of different species have diverged in evolution. Based on qRT-PCR results, all members of the CmGLP gene family could be expressed in different tissues of melon. Most CmGLP genes were up-regulated after low-temperature stress. The relative expression of CmGLP2-5 increased by 157.13 times at 48 h after low-temperature treatment. This finding suggests that the CmGLP2-5 might play an important role in low-temperature stress in melon. Furthermore, quantitative dual LUC assays indicated that CmMYB23 and CmWRKY33 can bind the promoter fragment of the CmGLP2-5. These results were helpful in understanding the functional succession and evolution of the melon GLP gene family and further revealed the response of CmGLPs to low-temperature stress in melon. MDPI 2022-07-25 /pmc/articles/PMC9330424/ /pubmed/35897766 http://dx.doi.org/10.3390/ijms23158190 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Zhengda
Wen, Yongshuai
Yuan, Luqiao
Zhang, Yuhui
Liu, Jingyi
Zhou, Fan
Wang, Qunning
Hu, Xiaohui
Genome-Wide Identification, Characterization, and Expression Analysis Related to Low-Temperature Stress of the CmGLP Gene Family in Cucumis melo L.
title Genome-Wide Identification, Characterization, and Expression Analysis Related to Low-Temperature Stress of the CmGLP Gene Family in Cucumis melo L.
title_full Genome-Wide Identification, Characterization, and Expression Analysis Related to Low-Temperature Stress of the CmGLP Gene Family in Cucumis melo L.
title_fullStr Genome-Wide Identification, Characterization, and Expression Analysis Related to Low-Temperature Stress of the CmGLP Gene Family in Cucumis melo L.
title_full_unstemmed Genome-Wide Identification, Characterization, and Expression Analysis Related to Low-Temperature Stress of the CmGLP Gene Family in Cucumis melo L.
title_short Genome-Wide Identification, Characterization, and Expression Analysis Related to Low-Temperature Stress of the CmGLP Gene Family in Cucumis melo L.
title_sort genome-wide identification, characterization, and expression analysis related to low-temperature stress of the cmglp gene family in cucumis melo l.
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9330424/
https://www.ncbi.nlm.nih.gov/pubmed/35897766
http://dx.doi.org/10.3390/ijms23158190
work_keys_str_mv AT zhangzhengda genomewideidentificationcharacterizationandexpressionanalysisrelatedtolowtemperaturestressofthecmglpgenefamilyincucumismelol
AT wenyongshuai genomewideidentificationcharacterizationandexpressionanalysisrelatedtolowtemperaturestressofthecmglpgenefamilyincucumismelol
AT yuanluqiao genomewideidentificationcharacterizationandexpressionanalysisrelatedtolowtemperaturestressofthecmglpgenefamilyincucumismelol
AT zhangyuhui genomewideidentificationcharacterizationandexpressionanalysisrelatedtolowtemperaturestressofthecmglpgenefamilyincucumismelol
AT liujingyi genomewideidentificationcharacterizationandexpressionanalysisrelatedtolowtemperaturestressofthecmglpgenefamilyincucumismelol
AT zhoufan genomewideidentificationcharacterizationandexpressionanalysisrelatedtolowtemperaturestressofthecmglpgenefamilyincucumismelol
AT wangqunning genomewideidentificationcharacterizationandexpressionanalysisrelatedtolowtemperaturestressofthecmglpgenefamilyincucumismelol
AT huxiaohui genomewideidentificationcharacterizationandexpressionanalysisrelatedtolowtemperaturestressofthecmglpgenefamilyincucumismelol