Cargando…
Lung Volume Calculation in Preclinical MicroCT: A Fast Geometrical Approach
In this study, we present a time-efficient protocol for thoracic volume calculation as a proxy for total lung volume. We hypothesize that lung volume can be calculated indirectly from this thoracic volume. We compared the measured thoracic volume with manually segmented and automatically thresholded...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9330811/ https://www.ncbi.nlm.nih.gov/pubmed/35893082 http://dx.doi.org/10.3390/jimaging8080204 |
_version_ | 1784758252498583552 |
---|---|
author | Camara, Juan Antonio Pujol, Anna Jimenez, Juan Jose Donate, Jaime Ferrer, Marina Vande Velde, Greetje |
author_facet | Camara, Juan Antonio Pujol, Anna Jimenez, Juan Jose Donate, Jaime Ferrer, Marina Vande Velde, Greetje |
author_sort | Camara, Juan Antonio |
collection | PubMed |
description | In this study, we present a time-efficient protocol for thoracic volume calculation as a proxy for total lung volume. We hypothesize that lung volume can be calculated indirectly from this thoracic volume. We compared the measured thoracic volume with manually segmented and automatically thresholded lung volumes, with manual segmentation as the gold standard. A linear regression formula was obtained and used for calculating the theoretical lung volume. This volume was compared with the gold standard volumes. In healthy animals, thoracic volume was 887.45 mm(3), manually delineated lung volume 554.33 mm(3) and thresholded aerated lung volume 495.38 mm(3) on average. Theoretical lung volume was 554.30 mm(3). Finally, the protocol was applied to three animal models of lung pathology (lung metastasis and transgenic primary lung tumor and fungal infection). In confirmed pathologic animals, thoracic volumes were: 893.20 mm(3), 860.12 and 1027.28 mm(3). Manually delineated volumes were 640.58, 503.91 and 882.42 mm(3), respectively. Thresholded lung volumes were 315.92 mm(3), 408.72 and 236 mm(3), respectively. Theoretical lung volume resulted in 635.28, 524.30 and 863.10.42 mm(3). No significant differences were observed between volumes. This confirmed the potential use of this protocol for lung volume calculation in pathologic models. |
format | Online Article Text |
id | pubmed-9330811 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93308112022-07-29 Lung Volume Calculation in Preclinical MicroCT: A Fast Geometrical Approach Camara, Juan Antonio Pujol, Anna Jimenez, Juan Jose Donate, Jaime Ferrer, Marina Vande Velde, Greetje J Imaging Article In this study, we present a time-efficient protocol for thoracic volume calculation as a proxy for total lung volume. We hypothesize that lung volume can be calculated indirectly from this thoracic volume. We compared the measured thoracic volume with manually segmented and automatically thresholded lung volumes, with manual segmentation as the gold standard. A linear regression formula was obtained and used for calculating the theoretical lung volume. This volume was compared with the gold standard volumes. In healthy animals, thoracic volume was 887.45 mm(3), manually delineated lung volume 554.33 mm(3) and thresholded aerated lung volume 495.38 mm(3) on average. Theoretical lung volume was 554.30 mm(3). Finally, the protocol was applied to three animal models of lung pathology (lung metastasis and transgenic primary lung tumor and fungal infection). In confirmed pathologic animals, thoracic volumes were: 893.20 mm(3), 860.12 and 1027.28 mm(3). Manually delineated volumes were 640.58, 503.91 and 882.42 mm(3), respectively. Thresholded lung volumes were 315.92 mm(3), 408.72 and 236 mm(3), respectively. Theoretical lung volume resulted in 635.28, 524.30 and 863.10.42 mm(3). No significant differences were observed between volumes. This confirmed the potential use of this protocol for lung volume calculation in pathologic models. MDPI 2022-07-22 /pmc/articles/PMC9330811/ /pubmed/35893082 http://dx.doi.org/10.3390/jimaging8080204 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Camara, Juan Antonio Pujol, Anna Jimenez, Juan Jose Donate, Jaime Ferrer, Marina Vande Velde, Greetje Lung Volume Calculation in Preclinical MicroCT: A Fast Geometrical Approach |
title | Lung Volume Calculation in Preclinical MicroCT: A Fast Geometrical Approach |
title_full | Lung Volume Calculation in Preclinical MicroCT: A Fast Geometrical Approach |
title_fullStr | Lung Volume Calculation in Preclinical MicroCT: A Fast Geometrical Approach |
title_full_unstemmed | Lung Volume Calculation in Preclinical MicroCT: A Fast Geometrical Approach |
title_short | Lung Volume Calculation in Preclinical MicroCT: A Fast Geometrical Approach |
title_sort | lung volume calculation in preclinical microct: a fast geometrical approach |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9330811/ https://www.ncbi.nlm.nih.gov/pubmed/35893082 http://dx.doi.org/10.3390/jimaging8080204 |
work_keys_str_mv | AT camarajuanantonio lungvolumecalculationinpreclinicalmicroctafastgeometricalapproach AT pujolanna lungvolumecalculationinpreclinicalmicroctafastgeometricalapproach AT jimenezjuanjose lungvolumecalculationinpreclinicalmicroctafastgeometricalapproach AT donatejaime lungvolumecalculationinpreclinicalmicroctafastgeometricalapproach AT ferrermarina lungvolumecalculationinpreclinicalmicroctafastgeometricalapproach AT vandeveldegreetje lungvolumecalculationinpreclinicalmicroctafastgeometricalapproach |