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Cloning and Characterization of a Novel Endo-Type Metal-Independent Alginate Lyase from the Marine Bacteria Vibrio sp. Ni1

The applications of alginate lyase are diverse, but efficient commercial enzymes are still unavailable. In this study, a novel alginate lyase with high activity was obtained from the marine bacteria Vibrio sp. Ni1. The ORF of the algB gene has 1824 bp, encoding 607 amino acids. Homology analysis sho...

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Autores principales: Sha, Li, Huang, Minghai, Huang, Xiaonan, Huang, Yongtong, Shao, Ensi, Guan, Xiong, Huang, Zhipeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9331746/
https://www.ncbi.nlm.nih.gov/pubmed/35892947
http://dx.doi.org/10.3390/md20080479
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author Sha, Li
Huang, Minghai
Huang, Xiaonan
Huang, Yongtong
Shao, Ensi
Guan, Xiong
Huang, Zhipeng
author_facet Sha, Li
Huang, Minghai
Huang, Xiaonan
Huang, Yongtong
Shao, Ensi
Guan, Xiong
Huang, Zhipeng
author_sort Sha, Li
collection PubMed
description The applications of alginate lyase are diverse, but efficient commercial enzymes are still unavailable. In this study, a novel alginate lyase with high activity was obtained from the marine bacteria Vibrio sp. Ni1. The ORF of the algB gene has 1824 bp, encoding 607 amino acids. Homology analysis shows that AlgB belongs to the PL7 family. There are two catalytic domains with the typical region of QIH found in AlgB. The purified recombinant enzyme of AlgB shows highest activity at 35 °C, pH 8.0, and 50 mmol/L Tris-HCl without any metal ions. Only K(+) slightly enhances the activity, while Fe(2+) and Cu(2+) strongly inhibit the activity. The AlgB preferred polyM as substrate. The end products of enzymatic mixture are DP2 and DP3, without any metal ion to assist them. This enzyme has good industrial application prospects.
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spelling pubmed-93317462022-07-29 Cloning and Characterization of a Novel Endo-Type Metal-Independent Alginate Lyase from the Marine Bacteria Vibrio sp. Ni1 Sha, Li Huang, Minghai Huang, Xiaonan Huang, Yongtong Shao, Ensi Guan, Xiong Huang, Zhipeng Mar Drugs Article The applications of alginate lyase are diverse, but efficient commercial enzymes are still unavailable. In this study, a novel alginate lyase with high activity was obtained from the marine bacteria Vibrio sp. Ni1. The ORF of the algB gene has 1824 bp, encoding 607 amino acids. Homology analysis shows that AlgB belongs to the PL7 family. There are two catalytic domains with the typical region of QIH found in AlgB. The purified recombinant enzyme of AlgB shows highest activity at 35 °C, pH 8.0, and 50 mmol/L Tris-HCl without any metal ions. Only K(+) slightly enhances the activity, while Fe(2+) and Cu(2+) strongly inhibit the activity. The AlgB preferred polyM as substrate. The end products of enzymatic mixture are DP2 and DP3, without any metal ion to assist them. This enzyme has good industrial application prospects. MDPI 2022-07-26 /pmc/articles/PMC9331746/ /pubmed/35892947 http://dx.doi.org/10.3390/md20080479 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sha, Li
Huang, Minghai
Huang, Xiaonan
Huang, Yongtong
Shao, Ensi
Guan, Xiong
Huang, Zhipeng
Cloning and Characterization of a Novel Endo-Type Metal-Independent Alginate Lyase from the Marine Bacteria Vibrio sp. Ni1
title Cloning and Characterization of a Novel Endo-Type Metal-Independent Alginate Lyase from the Marine Bacteria Vibrio sp. Ni1
title_full Cloning and Characterization of a Novel Endo-Type Metal-Independent Alginate Lyase from the Marine Bacteria Vibrio sp. Ni1
title_fullStr Cloning and Characterization of a Novel Endo-Type Metal-Independent Alginate Lyase from the Marine Bacteria Vibrio sp. Ni1
title_full_unstemmed Cloning and Characterization of a Novel Endo-Type Metal-Independent Alginate Lyase from the Marine Bacteria Vibrio sp. Ni1
title_short Cloning and Characterization of a Novel Endo-Type Metal-Independent Alginate Lyase from the Marine Bacteria Vibrio sp. Ni1
title_sort cloning and characterization of a novel endo-type metal-independent alginate lyase from the marine bacteria vibrio sp. ni1
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9331746/
https://www.ncbi.nlm.nih.gov/pubmed/35892947
http://dx.doi.org/10.3390/md20080479
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