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Bioinformatics Study of Aux/IAA Family Genes and Their Expression in Response to Different Hormones Treatments during Japanese Apricot Fruit Development and Ripening

Auxin/indole-3-acetic acid (Aux/IAA) is a transcriptional repressor in the auxin signaling pathway that plays a role in several plant growth and development as well as fruit and embryo development. However, it is unclear what role they play in Japanese apricot (Prunus mume) fruit development and mat...

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Autores principales: Iqbal, Shahid, Hayat, Faisal, Mushtaq, Naveed, Khalil-ur-Rehman, Muhammad, Khan, Ummara, Yasoob, Talat Bilal, Khan, Muhammad Nawaz, Ni, Zhaojun, Ting, Shi, Gao, Zhihong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332017/
https://www.ncbi.nlm.nih.gov/pubmed/35893602
http://dx.doi.org/10.3390/plants11151898
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author Iqbal, Shahid
Hayat, Faisal
Mushtaq, Naveed
Khalil-ur-Rehman, Muhammad
Khan, Ummara
Yasoob, Talat Bilal
Khan, Muhammad Nawaz
Ni, Zhaojun
Ting, Shi
Gao, Zhihong
author_facet Iqbal, Shahid
Hayat, Faisal
Mushtaq, Naveed
Khalil-ur-Rehman, Muhammad
Khan, Ummara
Yasoob, Talat Bilal
Khan, Muhammad Nawaz
Ni, Zhaojun
Ting, Shi
Gao, Zhihong
author_sort Iqbal, Shahid
collection PubMed
description Auxin/indole-3-acetic acid (Aux/IAA) is a transcriptional repressor in the auxin signaling pathway that plays a role in several plant growth and development as well as fruit and embryo development. However, it is unclear what role they play in Japanese apricot (Prunus mume) fruit development and maturity. To investigate the role of Aux/IAA genes in fruit texture, development, and maturity, we comprehensively identified and expressed 19 PmIAA genes, and demonstrated their conserved domains and homology across species. The majority of PmIAA genes are highly responsive and expressed in different hormone treatments. PmIAA2, PmIAA5, PmIAA7, PmIAA10, PmIAA13, PmIAA18, and PmIAA19 showed a substantial increase in expression, suggesting that these genes are involved in fruit growth and maturity. During fruit maturation, alteration in the expression of PmIAA genes in response to 1-Methylcyclopropene (1-MCP) treatment revealed an interaction between auxin and ethylene. The current study investigated the response of Aux/IAA development regulators to auxin during fruit ripening, with the goal of better understanding their potential application in functional genomics.
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spelling pubmed-93320172022-07-29 Bioinformatics Study of Aux/IAA Family Genes and Their Expression in Response to Different Hormones Treatments during Japanese Apricot Fruit Development and Ripening Iqbal, Shahid Hayat, Faisal Mushtaq, Naveed Khalil-ur-Rehman, Muhammad Khan, Ummara Yasoob, Talat Bilal Khan, Muhammad Nawaz Ni, Zhaojun Ting, Shi Gao, Zhihong Plants (Basel) Article Auxin/indole-3-acetic acid (Aux/IAA) is a transcriptional repressor in the auxin signaling pathway that plays a role in several plant growth and development as well as fruit and embryo development. However, it is unclear what role they play in Japanese apricot (Prunus mume) fruit development and maturity. To investigate the role of Aux/IAA genes in fruit texture, development, and maturity, we comprehensively identified and expressed 19 PmIAA genes, and demonstrated their conserved domains and homology across species. The majority of PmIAA genes are highly responsive and expressed in different hormone treatments. PmIAA2, PmIAA5, PmIAA7, PmIAA10, PmIAA13, PmIAA18, and PmIAA19 showed a substantial increase in expression, suggesting that these genes are involved in fruit growth and maturity. During fruit maturation, alteration in the expression of PmIAA genes in response to 1-Methylcyclopropene (1-MCP) treatment revealed an interaction between auxin and ethylene. The current study investigated the response of Aux/IAA development regulators to auxin during fruit ripening, with the goal of better understanding their potential application in functional genomics. MDPI 2022-07-22 /pmc/articles/PMC9332017/ /pubmed/35893602 http://dx.doi.org/10.3390/plants11151898 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Iqbal, Shahid
Hayat, Faisal
Mushtaq, Naveed
Khalil-ur-Rehman, Muhammad
Khan, Ummara
Yasoob, Talat Bilal
Khan, Muhammad Nawaz
Ni, Zhaojun
Ting, Shi
Gao, Zhihong
Bioinformatics Study of Aux/IAA Family Genes and Their Expression in Response to Different Hormones Treatments during Japanese Apricot Fruit Development and Ripening
title Bioinformatics Study of Aux/IAA Family Genes and Their Expression in Response to Different Hormones Treatments during Japanese Apricot Fruit Development and Ripening
title_full Bioinformatics Study of Aux/IAA Family Genes and Their Expression in Response to Different Hormones Treatments during Japanese Apricot Fruit Development and Ripening
title_fullStr Bioinformatics Study of Aux/IAA Family Genes and Their Expression in Response to Different Hormones Treatments during Japanese Apricot Fruit Development and Ripening
title_full_unstemmed Bioinformatics Study of Aux/IAA Family Genes and Their Expression in Response to Different Hormones Treatments during Japanese Apricot Fruit Development and Ripening
title_short Bioinformatics Study of Aux/IAA Family Genes and Their Expression in Response to Different Hormones Treatments during Japanese Apricot Fruit Development and Ripening
title_sort bioinformatics study of aux/iaa family genes and their expression in response to different hormones treatments during japanese apricot fruit development and ripening
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332017/
https://www.ncbi.nlm.nih.gov/pubmed/35893602
http://dx.doi.org/10.3390/plants11151898
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