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Developing a Method to Estimate the Downstream Metabolite Signals from Hyperpolarized [1-(13)C]Pyruvate
Hyperpolarized carbon-13 MRI has the advantage of allowing the study of glycolytic flow in vivo or in vitro dynamically in real-time. The apparent exchange rate constant of a metabolite dynamic signal reflects the metabolite changes of a disease. Downstream metabolites can have a low signal-to-noise...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332172/ https://www.ncbi.nlm.nih.gov/pubmed/35897987 http://dx.doi.org/10.3390/s22155480 |
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author | Hsieh, Ching-Yi Sung, Cheng-Hsuan Shen, Yi-Liang (Eric) Lai, Ying-Chieh Lu, Kuan-Ying Lin, Gigin |
author_facet | Hsieh, Ching-Yi Sung, Cheng-Hsuan Shen, Yi-Liang (Eric) Lai, Ying-Chieh Lu, Kuan-Ying Lin, Gigin |
author_sort | Hsieh, Ching-Yi |
collection | PubMed |
description | Hyperpolarized carbon-13 MRI has the advantage of allowing the study of glycolytic flow in vivo or in vitro dynamically in real-time. The apparent exchange rate constant of a metabolite dynamic signal reflects the metabolite changes of a disease. Downstream metabolites can have a low signal-to-noise ratio (SNR), causing apparent exchange rate constant inconsistencies. Thus, we developed a method that estimates a more accurate metabolite signal. This method utilizes a kinetic model and background noise to estimate metabolite signals. Simulations and in vitro studies with photon-irradiated and control groups were used to evaluate the procedure. Simulated and in vitro exchange rate constants estimated using our method were compared with the raw signal values. In vitro data were also compared to the Area-Under-Curve (AUC) of the cell medium in (13)C Nuclear Magnetic Resonance (NMR). In the simulations and in vitro experiments, our technique minimized metabolite signal fluctuations and maintained reliable apparent exchange rate constants. In addition, the apparent exchange rate constants of the metabolites showed differences between the irradiation and control groups after using our method. Comparing the in vitro results obtained using our method and NMR, both solutions showed consistency when uncertainty was considered, demonstrating that our method can accurately measure metabolite signals and show how glycolytic flow changes. The method enhanced the signals of the metabolites and clarified the metabolic phenotyping of tumor cells, which could benefit personalized health care and patient stratification in the future. |
format | Online Article Text |
id | pubmed-9332172 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93321722022-07-29 Developing a Method to Estimate the Downstream Metabolite Signals from Hyperpolarized [1-(13)C]Pyruvate Hsieh, Ching-Yi Sung, Cheng-Hsuan Shen, Yi-Liang (Eric) Lai, Ying-Chieh Lu, Kuan-Ying Lin, Gigin Sensors (Basel) Article Hyperpolarized carbon-13 MRI has the advantage of allowing the study of glycolytic flow in vivo or in vitro dynamically in real-time. The apparent exchange rate constant of a metabolite dynamic signal reflects the metabolite changes of a disease. Downstream metabolites can have a low signal-to-noise ratio (SNR), causing apparent exchange rate constant inconsistencies. Thus, we developed a method that estimates a more accurate metabolite signal. This method utilizes a kinetic model and background noise to estimate metabolite signals. Simulations and in vitro studies with photon-irradiated and control groups were used to evaluate the procedure. Simulated and in vitro exchange rate constants estimated using our method were compared with the raw signal values. In vitro data were also compared to the Area-Under-Curve (AUC) of the cell medium in (13)C Nuclear Magnetic Resonance (NMR). In the simulations and in vitro experiments, our technique minimized metabolite signal fluctuations and maintained reliable apparent exchange rate constants. In addition, the apparent exchange rate constants of the metabolites showed differences between the irradiation and control groups after using our method. Comparing the in vitro results obtained using our method and NMR, both solutions showed consistency when uncertainty was considered, demonstrating that our method can accurately measure metabolite signals and show how glycolytic flow changes. The method enhanced the signals of the metabolites and clarified the metabolic phenotyping of tumor cells, which could benefit personalized health care and patient stratification in the future. MDPI 2022-07-22 /pmc/articles/PMC9332172/ /pubmed/35897987 http://dx.doi.org/10.3390/s22155480 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Hsieh, Ching-Yi Sung, Cheng-Hsuan Shen, Yi-Liang (Eric) Lai, Ying-Chieh Lu, Kuan-Ying Lin, Gigin Developing a Method to Estimate the Downstream Metabolite Signals from Hyperpolarized [1-(13)C]Pyruvate |
title | Developing a Method to Estimate the Downstream Metabolite Signals from Hyperpolarized [1-(13)C]Pyruvate |
title_full | Developing a Method to Estimate the Downstream Metabolite Signals from Hyperpolarized [1-(13)C]Pyruvate |
title_fullStr | Developing a Method to Estimate the Downstream Metabolite Signals from Hyperpolarized [1-(13)C]Pyruvate |
title_full_unstemmed | Developing a Method to Estimate the Downstream Metabolite Signals from Hyperpolarized [1-(13)C]Pyruvate |
title_short | Developing a Method to Estimate the Downstream Metabolite Signals from Hyperpolarized [1-(13)C]Pyruvate |
title_sort | developing a method to estimate the downstream metabolite signals from hyperpolarized [1-(13)c]pyruvate |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332172/ https://www.ncbi.nlm.nih.gov/pubmed/35897987 http://dx.doi.org/10.3390/s22155480 |
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