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Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning
SIMPLE SUMMARY: We investigated the contouring data of organs at risk from 40 patients with breast cancer who underwent radiotherapy. The performance of denoising-based auto-segmentation was compared with manual segmentation and conventional deep-learning-based auto-segmentation without denoising. D...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332287/ https://www.ncbi.nlm.nih.gov/pubmed/35892839 http://dx.doi.org/10.3390/cancers14153581 |
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author | Im, Jung Ho Lee, Ik Jae Choi, Yeonho Sung, Jiwon Ha, Jin Sook Lee, Ho |
author_facet | Im, Jung Ho Lee, Ik Jae Choi, Yeonho Sung, Jiwon Ha, Jin Sook Lee, Ho |
author_sort | Im, Jung Ho |
collection | PubMed |
description | SIMPLE SUMMARY: We investigated the contouring data of organs at risk from 40 patients with breast cancer who underwent radiotherapy. The performance of denoising-based auto-segmentation was compared with manual segmentation and conventional deep-learning-based auto-segmentation without denoising. Denoising-based auto-segmentation achieved superior segmentation accuracy on the liver compared with AccuContour(TM)-based auto-segmentation. This denoising-based auto-segmentation method could provide more precise contour delineation of the liver and reduce the clinical workload. ABSTRACT: Objective: This study aimed to investigate the segmentation accuracy of organs at risk (OARs) when denoised computed tomography (CT) images are used as input data for a deep-learning-based auto-segmentation framework. Methods: We used non-contrast enhanced planning CT scans from 40 patients with breast cancer. The heart, lungs, esophagus, spinal cord, and liver were manually delineated by two experienced radiation oncologists in a double-blind manner. The denoised CT images were used as input data for the AccuContour(TM) segmentation software to increase the signal difference between structures of interest and unwanted noise in non-contrast CT. The accuracy of the segmentation was assessed using the Dice similarity coefficient (DSC), and the results were compared with those of conventional deep-learning-based auto-segmentation without denoising. Results: The average DSC outcomes were higher than 0.80 for all OARs except for the esophagus. AccuContour(TM)-based and denoising-based auto-segmentation demonstrated comparable performance for the lungs and spinal cord but showed limited performance for the esophagus. Denoising-based auto-segmentation for the liver was minimal but had statistically significantly better DSC than AccuContour(TM)-based auto-segmentation (p < 0.05). Conclusions: Denoising-based auto-segmentation demonstrated satisfactory performance in automatic liver segmentation from non-contrast enhanced CT scans. Further external validation studies with larger cohorts are needed to verify the usefulness of denoising-based auto-segmentation. |
format | Online Article Text |
id | pubmed-9332287 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93322872022-07-29 Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning Im, Jung Ho Lee, Ik Jae Choi, Yeonho Sung, Jiwon Ha, Jin Sook Lee, Ho Cancers (Basel) Article SIMPLE SUMMARY: We investigated the contouring data of organs at risk from 40 patients with breast cancer who underwent radiotherapy. The performance of denoising-based auto-segmentation was compared with manual segmentation and conventional deep-learning-based auto-segmentation without denoising. Denoising-based auto-segmentation achieved superior segmentation accuracy on the liver compared with AccuContour(TM)-based auto-segmentation. This denoising-based auto-segmentation method could provide more precise contour delineation of the liver and reduce the clinical workload. ABSTRACT: Objective: This study aimed to investigate the segmentation accuracy of organs at risk (OARs) when denoised computed tomography (CT) images are used as input data for a deep-learning-based auto-segmentation framework. Methods: We used non-contrast enhanced planning CT scans from 40 patients with breast cancer. The heart, lungs, esophagus, spinal cord, and liver were manually delineated by two experienced radiation oncologists in a double-blind manner. The denoised CT images were used as input data for the AccuContour(TM) segmentation software to increase the signal difference between structures of interest and unwanted noise in non-contrast CT. The accuracy of the segmentation was assessed using the Dice similarity coefficient (DSC), and the results were compared with those of conventional deep-learning-based auto-segmentation without denoising. Results: The average DSC outcomes were higher than 0.80 for all OARs except for the esophagus. AccuContour(TM)-based and denoising-based auto-segmentation demonstrated comparable performance for the lungs and spinal cord but showed limited performance for the esophagus. Denoising-based auto-segmentation for the liver was minimal but had statistically significantly better DSC than AccuContour(TM)-based auto-segmentation (p < 0.05). Conclusions: Denoising-based auto-segmentation demonstrated satisfactory performance in automatic liver segmentation from non-contrast enhanced CT scans. Further external validation studies with larger cohorts are needed to verify the usefulness of denoising-based auto-segmentation. MDPI 2022-07-22 /pmc/articles/PMC9332287/ /pubmed/35892839 http://dx.doi.org/10.3390/cancers14153581 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Im, Jung Ho Lee, Ik Jae Choi, Yeonho Sung, Jiwon Ha, Jin Sook Lee, Ho Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning |
title | Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning |
title_full | Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning |
title_fullStr | Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning |
title_full_unstemmed | Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning |
title_short | Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning |
title_sort | impact of denoising on deep-learning-based automatic segmentation framework for breast cancer radiotherapy planning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332287/ https://www.ncbi.nlm.nih.gov/pubmed/35892839 http://dx.doi.org/10.3390/cancers14153581 |
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