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Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning

SIMPLE SUMMARY: We investigated the contouring data of organs at risk from 40 patients with breast cancer who underwent radiotherapy. The performance of denoising-based auto-segmentation was compared with manual segmentation and conventional deep-learning-based auto-segmentation without denoising. D...

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Autores principales: Im, Jung Ho, Lee, Ik Jae, Choi, Yeonho, Sung, Jiwon, Ha, Jin Sook, Lee, Ho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332287/
https://www.ncbi.nlm.nih.gov/pubmed/35892839
http://dx.doi.org/10.3390/cancers14153581
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author Im, Jung Ho
Lee, Ik Jae
Choi, Yeonho
Sung, Jiwon
Ha, Jin Sook
Lee, Ho
author_facet Im, Jung Ho
Lee, Ik Jae
Choi, Yeonho
Sung, Jiwon
Ha, Jin Sook
Lee, Ho
author_sort Im, Jung Ho
collection PubMed
description SIMPLE SUMMARY: We investigated the contouring data of organs at risk from 40 patients with breast cancer who underwent radiotherapy. The performance of denoising-based auto-segmentation was compared with manual segmentation and conventional deep-learning-based auto-segmentation without denoising. Denoising-based auto-segmentation achieved superior segmentation accuracy on the liver compared with AccuContour(TM)-based auto-segmentation. This denoising-based auto-segmentation method could provide more precise contour delineation of the liver and reduce the clinical workload. ABSTRACT: Objective: This study aimed to investigate the segmentation accuracy of organs at risk (OARs) when denoised computed tomography (CT) images are used as input data for a deep-learning-based auto-segmentation framework. Methods: We used non-contrast enhanced planning CT scans from 40 patients with breast cancer. The heart, lungs, esophagus, spinal cord, and liver were manually delineated by two experienced radiation oncologists in a double-blind manner. The denoised CT images were used as input data for the AccuContour(TM) segmentation software to increase the signal difference between structures of interest and unwanted noise in non-contrast CT. The accuracy of the segmentation was assessed using the Dice similarity coefficient (DSC), and the results were compared with those of conventional deep-learning-based auto-segmentation without denoising. Results: The average DSC outcomes were higher than 0.80 for all OARs except for the esophagus. AccuContour(TM)-based and denoising-based auto-segmentation demonstrated comparable performance for the lungs and spinal cord but showed limited performance for the esophagus. Denoising-based auto-segmentation for the liver was minimal but had statistically significantly better DSC than AccuContour(TM)-based auto-segmentation (p < 0.05). Conclusions: Denoising-based auto-segmentation demonstrated satisfactory performance in automatic liver segmentation from non-contrast enhanced CT scans. Further external validation studies with larger cohorts are needed to verify the usefulness of denoising-based auto-segmentation.
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spelling pubmed-93322872022-07-29 Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning Im, Jung Ho Lee, Ik Jae Choi, Yeonho Sung, Jiwon Ha, Jin Sook Lee, Ho Cancers (Basel) Article SIMPLE SUMMARY: We investigated the contouring data of organs at risk from 40 patients with breast cancer who underwent radiotherapy. The performance of denoising-based auto-segmentation was compared with manual segmentation and conventional deep-learning-based auto-segmentation without denoising. Denoising-based auto-segmentation achieved superior segmentation accuracy on the liver compared with AccuContour(TM)-based auto-segmentation. This denoising-based auto-segmentation method could provide more precise contour delineation of the liver and reduce the clinical workload. ABSTRACT: Objective: This study aimed to investigate the segmentation accuracy of organs at risk (OARs) when denoised computed tomography (CT) images are used as input data for a deep-learning-based auto-segmentation framework. Methods: We used non-contrast enhanced planning CT scans from 40 patients with breast cancer. The heart, lungs, esophagus, spinal cord, and liver were manually delineated by two experienced radiation oncologists in a double-blind manner. The denoised CT images were used as input data for the AccuContour(TM) segmentation software to increase the signal difference between structures of interest and unwanted noise in non-contrast CT. The accuracy of the segmentation was assessed using the Dice similarity coefficient (DSC), and the results were compared with those of conventional deep-learning-based auto-segmentation without denoising. Results: The average DSC outcomes were higher than 0.80 for all OARs except for the esophagus. AccuContour(TM)-based and denoising-based auto-segmentation demonstrated comparable performance for the lungs and spinal cord but showed limited performance for the esophagus. Denoising-based auto-segmentation for the liver was minimal but had statistically significantly better DSC than AccuContour(TM)-based auto-segmentation (p < 0.05). Conclusions: Denoising-based auto-segmentation demonstrated satisfactory performance in automatic liver segmentation from non-contrast enhanced CT scans. Further external validation studies with larger cohorts are needed to verify the usefulness of denoising-based auto-segmentation. MDPI 2022-07-22 /pmc/articles/PMC9332287/ /pubmed/35892839 http://dx.doi.org/10.3390/cancers14153581 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Im, Jung Ho
Lee, Ik Jae
Choi, Yeonho
Sung, Jiwon
Ha, Jin Sook
Lee, Ho
Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning
title Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning
title_full Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning
title_fullStr Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning
title_full_unstemmed Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning
title_short Impact of Denoising on Deep-Learning-Based Automatic Segmentation Framework for Breast Cancer Radiotherapy Planning
title_sort impact of denoising on deep-learning-based automatic segmentation framework for breast cancer radiotherapy planning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332287/
https://www.ncbi.nlm.nih.gov/pubmed/35892839
http://dx.doi.org/10.3390/cancers14153581
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