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Ensemble Deep-Learning-Based Prognostic and Prediction for Recurrence of Sporadic Odontogenic Keratocysts on Hematoxylin and Eosin Stained Pathological Images of Incisional Biopsies

(1) Background: Odontogenic keratocysts (OKCs) are enigmatic developmental cysts that deserve special attention due to their heterogeneous appearance in histopathological characteristics and high recurrence rate. Despite several nomenclatures for classification, clinicians still confront challenges...

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Autores principales: Rao, Roopa S., Shivanna, Divya Biligere, Lakshminarayana, Surendra, Mahadevpur, Kirti Shankar, Alhazmi, Yaser Ali, Bakri, Mohammed Mousa H., Alharbi, Hazar S., Alzahrani, Khalid J., Alsharif, Khalaf F., Banjer, Hamsa Jameel, Alnfiai, Mrim M., Reda, Rodolfo, Patil, Shankargouda, Testarelli, Luca
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332803/
https://www.ncbi.nlm.nih.gov/pubmed/35893314
http://dx.doi.org/10.3390/jpm12081220
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author Rao, Roopa S.
Shivanna, Divya Biligere
Lakshminarayana, Surendra
Mahadevpur, Kirti Shankar
Alhazmi, Yaser Ali
Bakri, Mohammed Mousa H.
Alharbi, Hazar S.
Alzahrani, Khalid J.
Alsharif, Khalaf F.
Banjer, Hamsa Jameel
Alnfiai, Mrim M.
Reda, Rodolfo
Patil, Shankargouda
Testarelli, Luca
author_facet Rao, Roopa S.
Shivanna, Divya Biligere
Lakshminarayana, Surendra
Mahadevpur, Kirti Shankar
Alhazmi, Yaser Ali
Bakri, Mohammed Mousa H.
Alharbi, Hazar S.
Alzahrani, Khalid J.
Alsharif, Khalaf F.
Banjer, Hamsa Jameel
Alnfiai, Mrim M.
Reda, Rodolfo
Patil, Shankargouda
Testarelli, Luca
author_sort Rao, Roopa S.
collection PubMed
description (1) Background: Odontogenic keratocysts (OKCs) are enigmatic developmental cysts that deserve special attention due to their heterogeneous appearance in histopathological characteristics and high recurrence rate. Despite several nomenclatures for classification, clinicians still confront challenges in its diagnosis and predicting its recurrence. This paper proposes an ensemble deep-learning-based prognostic and prediction algorithm, for the recurrence of sporadic odontogenic keratocysts, on hematoxylin and eosin stained pathological images of incisional biopsies before treatment. (2) Materials and Methods: In this study, we applied a deep-learning algorithm to an ensemble approach integrated with DenseNet-121, Inception-V3, and Inception-Resnet-V3 classifiers. Around 1660 hematoxylin and eosin stained pathologically annotated digital images of OKC-diagnosed (60) patients were supplied to train and predict recurrent OKCs. (3) Results: The presence of SEH (p = 0.004), an incomplete epithelial lining, (p = 0.023), and a corrugated surface (p = 0.049) were the most significant histological parameters distinguishing recurrent and non-recurrent OKCs. Amongst the classifiers, DenseNet-121 showed 93% accuracy in predicting recurrent OKCs. Furthermore, integrating and training the traditional ensemble model showed an accuracy of 95% and an AUC of 0.9872, with an execution time of 192.9 s. In comparison, our proposed model showed 97% accuracy with an execution time of 154.6 s. (4) Conclusions: Considering the outcome of our novel ensemble model, based on accuracy and execution time, the presented design could be embedded into a computer-aided design system for automation of risk stratification of odontogenic keratocysts.
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spelling pubmed-93328032022-07-29 Ensemble Deep-Learning-Based Prognostic and Prediction for Recurrence of Sporadic Odontogenic Keratocysts on Hematoxylin and Eosin Stained Pathological Images of Incisional Biopsies Rao, Roopa S. Shivanna, Divya Biligere Lakshminarayana, Surendra Mahadevpur, Kirti Shankar Alhazmi, Yaser Ali Bakri, Mohammed Mousa H. Alharbi, Hazar S. Alzahrani, Khalid J. Alsharif, Khalaf F. Banjer, Hamsa Jameel Alnfiai, Mrim M. Reda, Rodolfo Patil, Shankargouda Testarelli, Luca J Pers Med Article (1) Background: Odontogenic keratocysts (OKCs) are enigmatic developmental cysts that deserve special attention due to their heterogeneous appearance in histopathological characteristics and high recurrence rate. Despite several nomenclatures for classification, clinicians still confront challenges in its diagnosis and predicting its recurrence. This paper proposes an ensemble deep-learning-based prognostic and prediction algorithm, for the recurrence of sporadic odontogenic keratocysts, on hematoxylin and eosin stained pathological images of incisional biopsies before treatment. (2) Materials and Methods: In this study, we applied a deep-learning algorithm to an ensemble approach integrated with DenseNet-121, Inception-V3, and Inception-Resnet-V3 classifiers. Around 1660 hematoxylin and eosin stained pathologically annotated digital images of OKC-diagnosed (60) patients were supplied to train and predict recurrent OKCs. (3) Results: The presence of SEH (p = 0.004), an incomplete epithelial lining, (p = 0.023), and a corrugated surface (p = 0.049) were the most significant histological parameters distinguishing recurrent and non-recurrent OKCs. Amongst the classifiers, DenseNet-121 showed 93% accuracy in predicting recurrent OKCs. Furthermore, integrating and training the traditional ensemble model showed an accuracy of 95% and an AUC of 0.9872, with an execution time of 192.9 s. In comparison, our proposed model showed 97% accuracy with an execution time of 154.6 s. (4) Conclusions: Considering the outcome of our novel ensemble model, based on accuracy and execution time, the presented design could be embedded into a computer-aided design system for automation of risk stratification of odontogenic keratocysts. MDPI 2022-07-27 /pmc/articles/PMC9332803/ /pubmed/35893314 http://dx.doi.org/10.3390/jpm12081220 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Rao, Roopa S.
Shivanna, Divya Biligere
Lakshminarayana, Surendra
Mahadevpur, Kirti Shankar
Alhazmi, Yaser Ali
Bakri, Mohammed Mousa H.
Alharbi, Hazar S.
Alzahrani, Khalid J.
Alsharif, Khalaf F.
Banjer, Hamsa Jameel
Alnfiai, Mrim M.
Reda, Rodolfo
Patil, Shankargouda
Testarelli, Luca
Ensemble Deep-Learning-Based Prognostic and Prediction for Recurrence of Sporadic Odontogenic Keratocysts on Hematoxylin and Eosin Stained Pathological Images of Incisional Biopsies
title Ensemble Deep-Learning-Based Prognostic and Prediction for Recurrence of Sporadic Odontogenic Keratocysts on Hematoxylin and Eosin Stained Pathological Images of Incisional Biopsies
title_full Ensemble Deep-Learning-Based Prognostic and Prediction for Recurrence of Sporadic Odontogenic Keratocysts on Hematoxylin and Eosin Stained Pathological Images of Incisional Biopsies
title_fullStr Ensemble Deep-Learning-Based Prognostic and Prediction for Recurrence of Sporadic Odontogenic Keratocysts on Hematoxylin and Eosin Stained Pathological Images of Incisional Biopsies
title_full_unstemmed Ensemble Deep-Learning-Based Prognostic and Prediction for Recurrence of Sporadic Odontogenic Keratocysts on Hematoxylin and Eosin Stained Pathological Images of Incisional Biopsies
title_short Ensemble Deep-Learning-Based Prognostic and Prediction for Recurrence of Sporadic Odontogenic Keratocysts on Hematoxylin and Eosin Stained Pathological Images of Incisional Biopsies
title_sort ensemble deep-learning-based prognostic and prediction for recurrence of sporadic odontogenic keratocysts on hematoxylin and eosin stained pathological images of incisional biopsies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332803/
https://www.ncbi.nlm.nih.gov/pubmed/35893314
http://dx.doi.org/10.3390/jpm12081220
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