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Role of Glycolysis/Gluconeogenesis and HIF-1 Signaling Pathways in Rats with Dental Fluorosis Integrated Proteomics and Metabolomics Analysis
Fluoride is widely distributed, and excessive intake will lead to dental fluorosis. In this study, six offspring rats administrated 100 mg/L sodium fluoride were defined as the dental fluorosis group, and eight offspring rats who received pure water were defined as the control group. Differentially...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332816/ https://www.ncbi.nlm.nih.gov/pubmed/35897842 http://dx.doi.org/10.3390/ijms23158266 |
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author | Ba, Yue Yang, Shuo Yu, Shuiyuan Hou, Xiangbo Du, Yuhui Gao, Minghui Zuo, Juan Sun, Lei Fu, Xiaoli Li, Zhiyuan Huang, Hui Zhou, Guoyu Yu, Fangfang |
author_facet | Ba, Yue Yang, Shuo Yu, Shuiyuan Hou, Xiangbo Du, Yuhui Gao, Minghui Zuo, Juan Sun, Lei Fu, Xiaoli Li, Zhiyuan Huang, Hui Zhou, Guoyu Yu, Fangfang |
author_sort | Ba, Yue |
collection | PubMed |
description | Fluoride is widely distributed, and excessive intake will lead to dental fluorosis. In this study, six offspring rats administrated 100 mg/L sodium fluoride were defined as the dental fluorosis group, and eight offspring rats who received pure water were defined as the control group. Differentially expressed proteins and metabolites extracted from peripheral blood were identified using the liquid chromatography tandem mass spectrometry and gas chromatography mass spectrometry, with the judgment criteria of fold change >1.2 or <0.83 and p < 0.05. A coexpression enrichment analysis using OmicsBean was conducted on the identified proteins and metabolites, and a false discovery rate (FDR) < 0.05 was considered significant. Human Protein Atlas was used to determine the subcellular distribution of hub proteins. The Gene Cards was used to verify results. A total of 123 up-regulated and 46 down-regulated proteins, and 12 up-regulated and 2 down-regulated metabolites were identified. The significant coexpression pathways were the HIF-1 (FDR = 1.86 × 10(−3)) and glycolysis/gluconeogenesis (FDR = 1.14 × 10(−10)). The results of validation analysis showed the proteins related to fluorine were mainly enriched in the cytoplasm and extrinsic component of the cytoplasmic side of the plasma membrane. The HIF-1 pathway (FDR = 1.01 × 10(−7)) was also identified. Therefore, the HIF-1 and glycolysis/gluconeogenesis pathways were significantly correlated with dental fluorosis. |
format | Online Article Text |
id | pubmed-9332816 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93328162022-07-29 Role of Glycolysis/Gluconeogenesis and HIF-1 Signaling Pathways in Rats with Dental Fluorosis Integrated Proteomics and Metabolomics Analysis Ba, Yue Yang, Shuo Yu, Shuiyuan Hou, Xiangbo Du, Yuhui Gao, Minghui Zuo, Juan Sun, Lei Fu, Xiaoli Li, Zhiyuan Huang, Hui Zhou, Guoyu Yu, Fangfang Int J Mol Sci Article Fluoride is widely distributed, and excessive intake will lead to dental fluorosis. In this study, six offspring rats administrated 100 mg/L sodium fluoride were defined as the dental fluorosis group, and eight offspring rats who received pure water were defined as the control group. Differentially expressed proteins and metabolites extracted from peripheral blood were identified using the liquid chromatography tandem mass spectrometry and gas chromatography mass spectrometry, with the judgment criteria of fold change >1.2 or <0.83 and p < 0.05. A coexpression enrichment analysis using OmicsBean was conducted on the identified proteins and metabolites, and a false discovery rate (FDR) < 0.05 was considered significant. Human Protein Atlas was used to determine the subcellular distribution of hub proteins. The Gene Cards was used to verify results. A total of 123 up-regulated and 46 down-regulated proteins, and 12 up-regulated and 2 down-regulated metabolites were identified. The significant coexpression pathways were the HIF-1 (FDR = 1.86 × 10(−3)) and glycolysis/gluconeogenesis (FDR = 1.14 × 10(−10)). The results of validation analysis showed the proteins related to fluorine were mainly enriched in the cytoplasm and extrinsic component of the cytoplasmic side of the plasma membrane. The HIF-1 pathway (FDR = 1.01 × 10(−7)) was also identified. Therefore, the HIF-1 and glycolysis/gluconeogenesis pathways were significantly correlated with dental fluorosis. MDPI 2022-07-27 /pmc/articles/PMC9332816/ /pubmed/35897842 http://dx.doi.org/10.3390/ijms23158266 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ba, Yue Yang, Shuo Yu, Shuiyuan Hou, Xiangbo Du, Yuhui Gao, Minghui Zuo, Juan Sun, Lei Fu, Xiaoli Li, Zhiyuan Huang, Hui Zhou, Guoyu Yu, Fangfang Role of Glycolysis/Gluconeogenesis and HIF-1 Signaling Pathways in Rats with Dental Fluorosis Integrated Proteomics and Metabolomics Analysis |
title | Role of Glycolysis/Gluconeogenesis and HIF-1 Signaling Pathways in Rats with Dental Fluorosis Integrated Proteomics and Metabolomics Analysis |
title_full | Role of Glycolysis/Gluconeogenesis and HIF-1 Signaling Pathways in Rats with Dental Fluorosis Integrated Proteomics and Metabolomics Analysis |
title_fullStr | Role of Glycolysis/Gluconeogenesis and HIF-1 Signaling Pathways in Rats with Dental Fluorosis Integrated Proteomics and Metabolomics Analysis |
title_full_unstemmed | Role of Glycolysis/Gluconeogenesis and HIF-1 Signaling Pathways in Rats with Dental Fluorosis Integrated Proteomics and Metabolomics Analysis |
title_short | Role of Glycolysis/Gluconeogenesis and HIF-1 Signaling Pathways in Rats with Dental Fluorosis Integrated Proteomics and Metabolomics Analysis |
title_sort | role of glycolysis/gluconeogenesis and hif-1 signaling pathways in rats with dental fluorosis integrated proteomics and metabolomics analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9332816/ https://www.ncbi.nlm.nih.gov/pubmed/35897842 http://dx.doi.org/10.3390/ijms23158266 |
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