Tourmaline: A containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake

BACKGROUND: Amplicon sequencing (metabarcoding) is a common method to survey diversity of environmental communities whereby a single genetic locus is amplified and sequenced from the DNA of whole or partial organisms, organismal traces (e.g., skin, mucus, feces), or microbes in an environmental samp...

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Detalles Bibliográficos
Autores principales: Thompson, Luke R, Anderson, Sean R, Den Uyl, Paul A, Patin, Nastassia V, Lim, Shen Jean, Sanderson, Grant, Goodwin, Kelly D
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9334028/
https://www.ncbi.nlm.nih.gov/pubmed/35902092
http://dx.doi.org/10.1093/gigascience/giac066

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9334028/
https://www.ncbi.nlm.nih.gov/pubmed/35902092
http://dx.doi.org/10.1093/gigascience/giac066

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