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SYK Is Associated With Malignant Phenotype and Immune Checkpoints in Diffuse Glioma
Background: Diffuse glioma, the most common intracranial malignant tumor, is characterized by immunosuppression. The prognostic significance and potential therapeutic value of SYK remain obscure. Here, we explored the performance of SYK in predicting patient outcomes and as a therapeutic target. Met...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9334658/ https://www.ncbi.nlm.nih.gov/pubmed/35910221 http://dx.doi.org/10.3389/fgene.2022.899883 |
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author | Zhou, Quanwei Wei, Min Shen, Wenyue Huang, Sheng Fan, Jianfeng Huang, He |
author_facet | Zhou, Quanwei Wei, Min Shen, Wenyue Huang, Sheng Fan, Jianfeng Huang, He |
author_sort | Zhou, Quanwei |
collection | PubMed |
description | Background: Diffuse glioma, the most common intracranial malignant tumor, is characterized by immunosuppression. The prognostic significance and potential therapeutic value of SYK remain obscure. Here, we explored the performance of SYK in predicting patient outcomes and as a therapeutic target. Methods: The mRNA expression and clinical data for pancancer and normal tissues and more than 2,000 glioma samples were collected from public databases. The expression level of SYK was evaluated by qPCR and IHC. The prognostic value of SYK was assessed using the Kaplan–Meier curves and univariate and multivariate Cox regression analyses. A sequence of immune and stromal infiltration analyses was calculated based on the ESTIMATE algorithm, ssGSEA algorithm, TIMER, and single-cell analysis. The SYK-related subtypes were identified via a Consensus Cluster Plus analysis. Results: SYK was significantly differentially expressed in multiple tumors and normal tissues. Importantly, high-expression SYK was enriched in malignant phenotypes of diffuse gliomas, which was further validated by qPCR and IHC. Survival analysis uncovered that SYK was an independently unfavorable prognostic marker in diffuse glioma. Functional enrichment analysis and immune and stromal infiltration analyses showed that SYK was involved in shaping the immunosuppressive microenvironment of diffuse glioma. Additionally, SYK expression was closely associated with some immune checkpoint molecules and M2 macrophage infiltration, which was validated by IHC and single-cell analysis. Diffuse glioma with Sub1 exhibited a worse prognosis, immunosuppressive microenvironment, and higher expression of immune checkpoint genes. Conclusion: SYK is involved in shaping the immunosuppressive microenvironment and served as a promising prognosis biomarker and immunotherapeutic target for diffuse glioma. |
format | Online Article Text |
id | pubmed-9334658 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93346582022-07-30 SYK Is Associated With Malignant Phenotype and Immune Checkpoints in Diffuse Glioma Zhou, Quanwei Wei, Min Shen, Wenyue Huang, Sheng Fan, Jianfeng Huang, He Front Genet Genetics Background: Diffuse glioma, the most common intracranial malignant tumor, is characterized by immunosuppression. The prognostic significance and potential therapeutic value of SYK remain obscure. Here, we explored the performance of SYK in predicting patient outcomes and as a therapeutic target. Methods: The mRNA expression and clinical data for pancancer and normal tissues and more than 2,000 glioma samples were collected from public databases. The expression level of SYK was evaluated by qPCR and IHC. The prognostic value of SYK was assessed using the Kaplan–Meier curves and univariate and multivariate Cox regression analyses. A sequence of immune and stromal infiltration analyses was calculated based on the ESTIMATE algorithm, ssGSEA algorithm, TIMER, and single-cell analysis. The SYK-related subtypes were identified via a Consensus Cluster Plus analysis. Results: SYK was significantly differentially expressed in multiple tumors and normal tissues. Importantly, high-expression SYK was enriched in malignant phenotypes of diffuse gliomas, which was further validated by qPCR and IHC. Survival analysis uncovered that SYK was an independently unfavorable prognostic marker in diffuse glioma. Functional enrichment analysis and immune and stromal infiltration analyses showed that SYK was involved in shaping the immunosuppressive microenvironment of diffuse glioma. Additionally, SYK expression was closely associated with some immune checkpoint molecules and M2 macrophage infiltration, which was validated by IHC and single-cell analysis. Diffuse glioma with Sub1 exhibited a worse prognosis, immunosuppressive microenvironment, and higher expression of immune checkpoint genes. Conclusion: SYK is involved in shaping the immunosuppressive microenvironment and served as a promising prognosis biomarker and immunotherapeutic target for diffuse glioma. Frontiers Media S.A. 2022-07-15 /pmc/articles/PMC9334658/ /pubmed/35910221 http://dx.doi.org/10.3389/fgene.2022.899883 Text en Copyright © 2022 Zhou, Wei, Shen, Huang, Fan and Huang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Zhou, Quanwei Wei, Min Shen, Wenyue Huang, Sheng Fan, Jianfeng Huang, He SYK Is Associated With Malignant Phenotype and Immune Checkpoints in Diffuse Glioma |
title | SYK Is Associated With Malignant Phenotype and Immune Checkpoints in Diffuse Glioma |
title_full | SYK Is Associated With Malignant Phenotype and Immune Checkpoints in Diffuse Glioma |
title_fullStr | SYK Is Associated With Malignant Phenotype and Immune Checkpoints in Diffuse Glioma |
title_full_unstemmed | SYK Is Associated With Malignant Phenotype and Immune Checkpoints in Diffuse Glioma |
title_short | SYK Is Associated With Malignant Phenotype and Immune Checkpoints in Diffuse Glioma |
title_sort | syk is associated with malignant phenotype and immune checkpoints in diffuse glioma |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9334658/ https://www.ncbi.nlm.nih.gov/pubmed/35910221 http://dx.doi.org/10.3389/fgene.2022.899883 |
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