Cargando…
Repurposing of a human antibody-based microarray to explore conserved components of the signalome of the parasitic nematode Haemonchus contortus
BACKGROUND: Gaining insight into molecular signalling pathways of socioeconomically important parasitic nematodes has implications for understanding their molecular biology and for developing novel anthelmintic interventions. METHODS: Here, we evaluated the use of a human antibody-based microarray t...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9338626/ https://www.ncbi.nlm.nih.gov/pubmed/35907892 http://dx.doi.org/10.1186/s13071-022-05400-w |
_version_ | 1784760011943051264 |
---|---|
author | Adderley, Jack Wang, Tao Ma, Guangxu Zheng, Yuanting Young, Neil D. Doerig, Christian Gasser, Robin B. |
author_facet | Adderley, Jack Wang, Tao Ma, Guangxu Zheng, Yuanting Young, Neil D. Doerig, Christian Gasser, Robin B. |
author_sort | Adderley, Jack |
collection | PubMed |
description | BACKGROUND: Gaining insight into molecular signalling pathways of socioeconomically important parasitic nematodes has implications for understanding their molecular biology and for developing novel anthelmintic interventions. METHODS: Here, we evaluated the use of a human antibody-based microarray to explore conserved elements of the signalome in the barber’s pole worm Haemonchus contortus. To do this, we prepared extracts from mixed-sex (female and male) adult worms and third-stage larvae (L3s), incubated these extracts on the antibody microarray and then measured the amounts of antibody-bound proteins (‘signal intensity’). RESULTS: In total, 878 signals were classified into two distinct categories: signals that were higher for adults than for larvae of H. contortus (n = 376), and signals that were higher for larvae than for adults of this species (n = 502). Following a data-filtering step, high confidence (‘specific’) signals were obtained for subsequent analyses. In total, 39 pan-specific signals (linked to antibodies that recognise target proteins irrespective of their phosphorylation status) and 65 phosphorylation-specific signals were higher in the adult stage, and 82 pan-specific signals and 183 phosphorylation-specific signals were higher in L3s. Thus, notably more signals were higher in L3s than in the adult worms. Using publicly available information, we then inferred H. contortus proteins that were detected (with high confidence) by specific antibodies directed against human homologues, and revealed relatively high structural conservation between the two species, with some variability for select proteins. We also in silico-matched 763 compound structures (listed in the DrugBank and Kinase SARfari public databases) to four H. contortus proteins (designated HCON_00005760, HCON_00079680, HCON_00013590 and HCON_00105100). CONCLUSIONS: We conclude that the present antibody-based microarray provides a useful tool for comparative analyses of signalling pathways between/among developmental stages and/or species, as well as opportunities to explore nematocidal target candidates in H. contortus and related parasites. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13071-022-05400-w. |
format | Online Article Text |
id | pubmed-9338626 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-93386262022-07-31 Repurposing of a human antibody-based microarray to explore conserved components of the signalome of the parasitic nematode Haemonchus contortus Adderley, Jack Wang, Tao Ma, Guangxu Zheng, Yuanting Young, Neil D. Doerig, Christian Gasser, Robin B. Parasit Vectors Brief Report BACKGROUND: Gaining insight into molecular signalling pathways of socioeconomically important parasitic nematodes has implications for understanding their molecular biology and for developing novel anthelmintic interventions. METHODS: Here, we evaluated the use of a human antibody-based microarray to explore conserved elements of the signalome in the barber’s pole worm Haemonchus contortus. To do this, we prepared extracts from mixed-sex (female and male) adult worms and third-stage larvae (L3s), incubated these extracts on the antibody microarray and then measured the amounts of antibody-bound proteins (‘signal intensity’). RESULTS: In total, 878 signals were classified into two distinct categories: signals that were higher for adults than for larvae of H. contortus (n = 376), and signals that were higher for larvae than for adults of this species (n = 502). Following a data-filtering step, high confidence (‘specific’) signals were obtained for subsequent analyses. In total, 39 pan-specific signals (linked to antibodies that recognise target proteins irrespective of their phosphorylation status) and 65 phosphorylation-specific signals were higher in the adult stage, and 82 pan-specific signals and 183 phosphorylation-specific signals were higher in L3s. Thus, notably more signals were higher in L3s than in the adult worms. Using publicly available information, we then inferred H. contortus proteins that were detected (with high confidence) by specific antibodies directed against human homologues, and revealed relatively high structural conservation between the two species, with some variability for select proteins. We also in silico-matched 763 compound structures (listed in the DrugBank and Kinase SARfari public databases) to four H. contortus proteins (designated HCON_00005760, HCON_00079680, HCON_00013590 and HCON_00105100). CONCLUSIONS: We conclude that the present antibody-based microarray provides a useful tool for comparative analyses of signalling pathways between/among developmental stages and/or species, as well as opportunities to explore nematocidal target candidates in H. contortus and related parasites. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13071-022-05400-w. BioMed Central 2022-07-30 /pmc/articles/PMC9338626/ /pubmed/35907892 http://dx.doi.org/10.1186/s13071-022-05400-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Brief Report Adderley, Jack Wang, Tao Ma, Guangxu Zheng, Yuanting Young, Neil D. Doerig, Christian Gasser, Robin B. Repurposing of a human antibody-based microarray to explore conserved components of the signalome of the parasitic nematode Haemonchus contortus |
title | Repurposing of a human antibody-based microarray to explore conserved components of the signalome of the parasitic nematode Haemonchus contortus |
title_full | Repurposing of a human antibody-based microarray to explore conserved components of the signalome of the parasitic nematode Haemonchus contortus |
title_fullStr | Repurposing of a human antibody-based microarray to explore conserved components of the signalome of the parasitic nematode Haemonchus contortus |
title_full_unstemmed | Repurposing of a human antibody-based microarray to explore conserved components of the signalome of the parasitic nematode Haemonchus contortus |
title_short | Repurposing of a human antibody-based microarray to explore conserved components of the signalome of the parasitic nematode Haemonchus contortus |
title_sort | repurposing of a human antibody-based microarray to explore conserved components of the signalome of the parasitic nematode haemonchus contortus |
topic | Brief Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9338626/ https://www.ncbi.nlm.nih.gov/pubmed/35907892 http://dx.doi.org/10.1186/s13071-022-05400-w |
work_keys_str_mv | AT adderleyjack repurposingofahumanantibodybasedmicroarraytoexploreconservedcomponentsofthesignalomeoftheparasiticnematodehaemonchuscontortus AT wangtao repurposingofahumanantibodybasedmicroarraytoexploreconservedcomponentsofthesignalomeoftheparasiticnematodehaemonchuscontortus AT maguangxu repurposingofahumanantibodybasedmicroarraytoexploreconservedcomponentsofthesignalomeoftheparasiticnematodehaemonchuscontortus AT zhengyuanting repurposingofahumanantibodybasedmicroarraytoexploreconservedcomponentsofthesignalomeoftheparasiticnematodehaemonchuscontortus AT youngneild repurposingofahumanantibodybasedmicroarraytoexploreconservedcomponentsofthesignalomeoftheparasiticnematodehaemonchuscontortus AT doerigchristian repurposingofahumanantibodybasedmicroarraytoexploreconservedcomponentsofthesignalomeoftheparasiticnematodehaemonchuscontortus AT gasserrobinb repurposingofahumanantibodybasedmicroarraytoexploreconservedcomponentsofthesignalomeoftheparasiticnematodehaemonchuscontortus |