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Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers
Gastrointestinal cancers (GICs) are high-incidence malignant tumors that seriously threaten human health around the world. Their complexity and heterogeneity make the classic staging system insufficient to guide patient management. Recently, competing endogenous RNA (ceRNA) interactions that closely...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9339642/ https://www.ncbi.nlm.nih.gov/pubmed/35924172 http://dx.doi.org/10.3389/fonc.2022.921194 |
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author | Qi, Xin Chen, Xingqi Zhao, Yuanchun Chen, Jiajia Niu, Beifang Shen, Bairong |
author_facet | Qi, Xin Chen, Xingqi Zhao, Yuanchun Chen, Jiajia Niu, Beifang Shen, Bairong |
author_sort | Qi, Xin |
collection | PubMed |
description | Gastrointestinal cancers (GICs) are high-incidence malignant tumors that seriously threaten human health around the world. Their complexity and heterogeneity make the classic staging system insufficient to guide patient management. Recently, competing endogenous RNA (ceRNA) interactions that closely link the function of protein-coding RNAs with that of non-coding RNAs, such as long non-coding RNA (lncRNA) and circular RNA (circRNA), has emerged as a novel molecular mechanism influencing miRNA-mediated gene regulation. Especially, ceRNA networks have proven to be powerful tools for deciphering cancer mechanisms and predicting therapeutic responses at the system level. Moreover, abnormal gene expression is one of the critical breaking events that disturb the stability of ceRNA network, highlighting the role of molecular biomarkers in optimizing cancer management and treatment. Therefore, developing prognostic signatures based on cancer-specific ceRNA network is of great significance for predicting clinical outcome or chemotherapy benefits of GIC patients. We herein introduce the current frontiers of ceRNA crosstalk in relation to their pathological implications and translational potentials in GICs, review the current researches on the prognostic signatures based on lncRNA or circRNA-mediated ceRNA networks in GICs, and highlight the translational implications of ceRNA signatures for GICs management. Furthermore, we summarize the computational approaches for establishing ceRNA network-based prognostic signatures, providing important clues for deciphering GIC biomarkers. |
format | Online Article Text |
id | pubmed-9339642 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93396422022-08-02 Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers Qi, Xin Chen, Xingqi Zhao, Yuanchun Chen, Jiajia Niu, Beifang Shen, Bairong Front Oncol Oncology Gastrointestinal cancers (GICs) are high-incidence malignant tumors that seriously threaten human health around the world. Their complexity and heterogeneity make the classic staging system insufficient to guide patient management. Recently, competing endogenous RNA (ceRNA) interactions that closely link the function of protein-coding RNAs with that of non-coding RNAs, such as long non-coding RNA (lncRNA) and circular RNA (circRNA), has emerged as a novel molecular mechanism influencing miRNA-mediated gene regulation. Especially, ceRNA networks have proven to be powerful tools for deciphering cancer mechanisms and predicting therapeutic responses at the system level. Moreover, abnormal gene expression is one of the critical breaking events that disturb the stability of ceRNA network, highlighting the role of molecular biomarkers in optimizing cancer management and treatment. Therefore, developing prognostic signatures based on cancer-specific ceRNA network is of great significance for predicting clinical outcome or chemotherapy benefits of GIC patients. We herein introduce the current frontiers of ceRNA crosstalk in relation to their pathological implications and translational potentials in GICs, review the current researches on the prognostic signatures based on lncRNA or circRNA-mediated ceRNA networks in GICs, and highlight the translational implications of ceRNA signatures for GICs management. Furthermore, we summarize the computational approaches for establishing ceRNA network-based prognostic signatures, providing important clues for deciphering GIC biomarkers. Frontiers Media S.A. 2022-07-18 /pmc/articles/PMC9339642/ /pubmed/35924172 http://dx.doi.org/10.3389/fonc.2022.921194 Text en Copyright © 2022 Qi, Chen, Zhao, Chen, Niu and Shen https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Qi, Xin Chen, Xingqi Zhao, Yuanchun Chen, Jiajia Niu, Beifang Shen, Bairong Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers |
title | Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers |
title_full | Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers |
title_fullStr | Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers |
title_full_unstemmed | Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers |
title_short | Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers |
title_sort | prognostic roles of cerna network-based signatures in gastrointestinal cancers |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9339642/ https://www.ncbi.nlm.nih.gov/pubmed/35924172 http://dx.doi.org/10.3389/fonc.2022.921194 |
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