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Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers

Gastrointestinal cancers (GICs) are high-incidence malignant tumors that seriously threaten human health around the world. Their complexity and heterogeneity make the classic staging system insufficient to guide patient management. Recently, competing endogenous RNA (ceRNA) interactions that closely...

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Autores principales: Qi, Xin, Chen, Xingqi, Zhao, Yuanchun, Chen, Jiajia, Niu, Beifang, Shen, Bairong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9339642/
https://www.ncbi.nlm.nih.gov/pubmed/35924172
http://dx.doi.org/10.3389/fonc.2022.921194
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author Qi, Xin
Chen, Xingqi
Zhao, Yuanchun
Chen, Jiajia
Niu, Beifang
Shen, Bairong
author_facet Qi, Xin
Chen, Xingqi
Zhao, Yuanchun
Chen, Jiajia
Niu, Beifang
Shen, Bairong
author_sort Qi, Xin
collection PubMed
description Gastrointestinal cancers (GICs) are high-incidence malignant tumors that seriously threaten human health around the world. Their complexity and heterogeneity make the classic staging system insufficient to guide patient management. Recently, competing endogenous RNA (ceRNA) interactions that closely link the function of protein-coding RNAs with that of non-coding RNAs, such as long non-coding RNA (lncRNA) and circular RNA (circRNA), has emerged as a novel molecular mechanism influencing miRNA-mediated gene regulation. Especially, ceRNA networks have proven to be powerful tools for deciphering cancer mechanisms and predicting therapeutic responses at the system level. Moreover, abnormal gene expression is one of the critical breaking events that disturb the stability of ceRNA network, highlighting the role of molecular biomarkers in optimizing cancer management and treatment. Therefore, developing prognostic signatures based on cancer-specific ceRNA network is of great significance for predicting clinical outcome or chemotherapy benefits of GIC patients. We herein introduce the current frontiers of ceRNA crosstalk in relation to their pathological implications and translational potentials in GICs, review the current researches on the prognostic signatures based on lncRNA or circRNA-mediated ceRNA networks in GICs, and highlight the translational implications of ceRNA signatures for GICs management. Furthermore, we summarize the computational approaches for establishing ceRNA network-based prognostic signatures, providing important clues for deciphering GIC biomarkers.
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spelling pubmed-93396422022-08-02 Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers Qi, Xin Chen, Xingqi Zhao, Yuanchun Chen, Jiajia Niu, Beifang Shen, Bairong Front Oncol Oncology Gastrointestinal cancers (GICs) are high-incidence malignant tumors that seriously threaten human health around the world. Their complexity and heterogeneity make the classic staging system insufficient to guide patient management. Recently, competing endogenous RNA (ceRNA) interactions that closely link the function of protein-coding RNAs with that of non-coding RNAs, such as long non-coding RNA (lncRNA) and circular RNA (circRNA), has emerged as a novel molecular mechanism influencing miRNA-mediated gene regulation. Especially, ceRNA networks have proven to be powerful tools for deciphering cancer mechanisms and predicting therapeutic responses at the system level. Moreover, abnormal gene expression is one of the critical breaking events that disturb the stability of ceRNA network, highlighting the role of molecular biomarkers in optimizing cancer management and treatment. Therefore, developing prognostic signatures based on cancer-specific ceRNA network is of great significance for predicting clinical outcome or chemotherapy benefits of GIC patients. We herein introduce the current frontiers of ceRNA crosstalk in relation to their pathological implications and translational potentials in GICs, review the current researches on the prognostic signatures based on lncRNA or circRNA-mediated ceRNA networks in GICs, and highlight the translational implications of ceRNA signatures for GICs management. Furthermore, we summarize the computational approaches for establishing ceRNA network-based prognostic signatures, providing important clues for deciphering GIC biomarkers. Frontiers Media S.A. 2022-07-18 /pmc/articles/PMC9339642/ /pubmed/35924172 http://dx.doi.org/10.3389/fonc.2022.921194 Text en Copyright © 2022 Qi, Chen, Zhao, Chen, Niu and Shen https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Qi, Xin
Chen, Xingqi
Zhao, Yuanchun
Chen, Jiajia
Niu, Beifang
Shen, Bairong
Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers
title Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers
title_full Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers
title_fullStr Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers
title_full_unstemmed Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers
title_short Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers
title_sort prognostic roles of cerna network-based signatures in gastrointestinal cancers
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9339642/
https://www.ncbi.nlm.nih.gov/pubmed/35924172
http://dx.doi.org/10.3389/fonc.2022.921194
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