Cargando…
Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates
This data article describes the whole-genome sequencing and in vitro activity data of Escherichia phage NTEC3 isolated from a community sewage sample in Chandigarh, India. The phage NTEC3 was active against multi-drug-resistant (MDR) and extensively drug-resistant (XDR) biofilm-forming Uropathogenic...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9340528/ https://www.ncbi.nlm.nih.gov/pubmed/35924093 http://dx.doi.org/10.1016/j.dib.2022.108479 |
_version_ | 1784760424077459456 |
---|---|
author | Chaudhary, Naveen Singh, Dharminder Maurya, Ravi Kumar Mohan, Balvinder Mavuduru, Ravimohan S. Taneja, Neelam |
author_facet | Chaudhary, Naveen Singh, Dharminder Maurya, Ravi Kumar Mohan, Balvinder Mavuduru, Ravimohan S. Taneja, Neelam |
author_sort | Chaudhary, Naveen |
collection | PubMed |
description | This data article describes the whole-genome sequencing and in vitro activity data of Escherichia phage NTEC3 isolated from a community sewage sample in Chandigarh, India. The phage NTEC3 was active against multi-drug-resistant (MDR) and extensively drug-resistant (XDR) biofilm-forming Uropathogenic Escherichia coli (UPEC) strains. The genome of this phage was linear, double-stranded, and 44.2 kb long in size. A total of 72 ORFs (open reading frames) were predicted and 30 ORFs were encoded for functional proteins. The phage belonged to the Kagunavirus genus of the Siphoviridae family. Phylogenetic analysis using DNA polymerase was performed to understand the phage evolutionary relationships. Genes encoding for lysogeny, virulence, toxins, antibiotic resistance, and the CRISPR/CRISPR-like system were not found during screening. The annotated genome was deposited in Genbank under the accession number OK539620. |
format | Online Article Text |
id | pubmed-9340528 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-93405282022-08-02 Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates Chaudhary, Naveen Singh, Dharminder Maurya, Ravi Kumar Mohan, Balvinder Mavuduru, Ravimohan S. Taneja, Neelam Data Brief Data Article This data article describes the whole-genome sequencing and in vitro activity data of Escherichia phage NTEC3 isolated from a community sewage sample in Chandigarh, India. The phage NTEC3 was active against multi-drug-resistant (MDR) and extensively drug-resistant (XDR) biofilm-forming Uropathogenic Escherichia coli (UPEC) strains. The genome of this phage was linear, double-stranded, and 44.2 kb long in size. A total of 72 ORFs (open reading frames) were predicted and 30 ORFs were encoded for functional proteins. The phage belonged to the Kagunavirus genus of the Siphoviridae family. Phylogenetic analysis using DNA polymerase was performed to understand the phage evolutionary relationships. Genes encoding for lysogeny, virulence, toxins, antibiotic resistance, and the CRISPR/CRISPR-like system were not found during screening. The annotated genome was deposited in Genbank under the accession number OK539620. Elsevier 2022-07-18 /pmc/articles/PMC9340528/ /pubmed/35924093 http://dx.doi.org/10.1016/j.dib.2022.108479 Text en © 2022 Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Chaudhary, Naveen Singh, Dharminder Maurya, Ravi Kumar Mohan, Balvinder Mavuduru, Ravimohan S. Taneja, Neelam Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
title | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
title_full | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
title_fullStr | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
title_full_unstemmed | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
title_short | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
title_sort | whole genome sequencing and in vitro activity data of escherichia phage ntec3 against multidrug-resistant uropathogenic and extensively drug-resistant uropathogenic e. coli isolates |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9340528/ https://www.ncbi.nlm.nih.gov/pubmed/35924093 http://dx.doi.org/10.1016/j.dib.2022.108479 |
work_keys_str_mv | AT chaudharynaveen wholegenomesequencingandinvitroactivitydataofescherichiaphagentec3againstmultidrugresistanturopathogenicandextensivelydrugresistanturopathogenicecoliisolates AT singhdharminder wholegenomesequencingandinvitroactivitydataofescherichiaphagentec3againstmultidrugresistanturopathogenicandextensivelydrugresistanturopathogenicecoliisolates AT mauryaravikumar wholegenomesequencingandinvitroactivitydataofescherichiaphagentec3againstmultidrugresistanturopathogenicandextensivelydrugresistanturopathogenicecoliisolates AT mohanbalvinder wholegenomesequencingandinvitroactivitydataofescherichiaphagentec3againstmultidrugresistanturopathogenicandextensivelydrugresistanturopathogenicecoliisolates AT mavudururavimohans wholegenomesequencingandinvitroactivitydataofescherichiaphagentec3againstmultidrugresistanturopathogenicandextensivelydrugresistanturopathogenicecoliisolates AT tanejaneelam wholegenomesequencingandinvitroactivitydataofescherichiaphagentec3againstmultidrugresistanturopathogenicandextensivelydrugresistanturopathogenicecoliisolates |