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Machine learning algorithms’ accuracy in predicting kidney disease progression: a systematic review and meta-analysis

BACKGROUND: Kidney disease progression rates vary among patients. Rapid and accurate prediction of kidney disease outcomes is crucial for disease management. In recent years, various prediction models using Machine Learning (ML) algorithms have been established in nephrology. However, their accuracy...

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Autores principales: Lei, Nuo, Zhang, Xianlong, Wei, Mengting, Lao, Beini, Xu, Xueyi, Zhang, Min, Chen, Huifen, Xu, Yanmin, Xia, Bingqing, Zhang, Dingjun, Dong, Chendi, Fu, Lizhe, Tang, Fang, Wu, Yifan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9341041/
https://www.ncbi.nlm.nih.gov/pubmed/35915457
http://dx.doi.org/10.1186/s12911-022-01951-1
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author Lei, Nuo
Zhang, Xianlong
Wei, Mengting
Lao, Beini
Xu, Xueyi
Zhang, Min
Chen, Huifen
Xu, Yanmin
Xia, Bingqing
Zhang, Dingjun
Dong, Chendi
Fu, Lizhe
Tang, Fang
Wu, Yifan
author_facet Lei, Nuo
Zhang, Xianlong
Wei, Mengting
Lao, Beini
Xu, Xueyi
Zhang, Min
Chen, Huifen
Xu, Yanmin
Xia, Bingqing
Zhang, Dingjun
Dong, Chendi
Fu, Lizhe
Tang, Fang
Wu, Yifan
author_sort Lei, Nuo
collection PubMed
description BACKGROUND: Kidney disease progression rates vary among patients. Rapid and accurate prediction of kidney disease outcomes is crucial for disease management. In recent years, various prediction models using Machine Learning (ML) algorithms have been established in nephrology. However, their accuracy have been inconsistent. Therefore, we conducted a systematic review and meta-analysis to investigate the diagnostic accuracy of ML algorithms for kidney disease progression. METHODS: We searched PubMed, EMBASE, Cochrane Central Register of Controlled Trials, the Chinese Biomedicine Literature Database, Chinese National Knowledge Infrastructure, Wanfang Database, and the VIP Database for diagnostic studies on ML algorithms’ accuracy in predicting kidney disease prognosis, from the establishment of these databases until October 2020. Two investigators independently evaluate study quality by QUADAS-2 tool and extracted data from single ML algorithm for data synthesis using the bivariate model and the hierarchical summary receiver operating characteristic (HSROC) model. RESULTS: Fifteen studies were left after screening, only 6 studies were eligible for data synthesis. The sample size of these 6 studies was 12,534, and the kidney disease types could be divided into chronic kidney disease (CKD) and Immunoglobulin A Nephropathy, with 5 articles using end-stage renal diseases occurrence as the primary outcome. The main results indicated that the area under curve (AUC) of the HSROC was 0.87 (0.84–0.90) and ML algorithm exhibited a strong specificity, 95% confidence interval and heterogeneity (I(2)) of (0.87, 0.84–0.90, [I(2) 99.0%]) and a weak sensitivity of (0.68, 0.58–0.77, [I(2) 99.7%]) in predicting kidney disease deterioration. And the the results of subgroup analysis indicated that ML algorithm’s AUC for predicting CKD prognosis was 0.82 (0.79–0.85), with the pool sensitivity of (0.64, 0.49–0.77, [I(2) 99.20%]) and pool specificity of (0.84, 0.74–0.91, [I(2) 99.84%]). The ML algorithm’s AUC for predicting IgA nephropathy prognosis was 0.78 (0.74–0.81), with the pool sensitivity of (0.74, 0.71–0.77, [I(2) 7.10%]) and pool specificity of (0.93, 0.91–0.95, [I(2) 83.92%]). CONCLUSION: Taking advantage of big data, ML algorithm-based prediction models have high accuracy in predicting kidney disease progression, we recommend ML algorithms as an auxiliary tool for clinicians to determine proper treatment and disease management strategies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-01951-1.
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spelling pubmed-93410412022-08-02 Machine learning algorithms’ accuracy in predicting kidney disease progression: a systematic review and meta-analysis Lei, Nuo Zhang, Xianlong Wei, Mengting Lao, Beini Xu, Xueyi Zhang, Min Chen, Huifen Xu, Yanmin Xia, Bingqing Zhang, Dingjun Dong, Chendi Fu, Lizhe Tang, Fang Wu, Yifan BMC Med Inform Decis Mak Research BACKGROUND: Kidney disease progression rates vary among patients. Rapid and accurate prediction of kidney disease outcomes is crucial for disease management. In recent years, various prediction models using Machine Learning (ML) algorithms have been established in nephrology. However, their accuracy have been inconsistent. Therefore, we conducted a systematic review and meta-analysis to investigate the diagnostic accuracy of ML algorithms for kidney disease progression. METHODS: We searched PubMed, EMBASE, Cochrane Central Register of Controlled Trials, the Chinese Biomedicine Literature Database, Chinese National Knowledge Infrastructure, Wanfang Database, and the VIP Database for diagnostic studies on ML algorithms’ accuracy in predicting kidney disease prognosis, from the establishment of these databases until October 2020. Two investigators independently evaluate study quality by QUADAS-2 tool and extracted data from single ML algorithm for data synthesis using the bivariate model and the hierarchical summary receiver operating characteristic (HSROC) model. RESULTS: Fifteen studies were left after screening, only 6 studies were eligible for data synthesis. The sample size of these 6 studies was 12,534, and the kidney disease types could be divided into chronic kidney disease (CKD) and Immunoglobulin A Nephropathy, with 5 articles using end-stage renal diseases occurrence as the primary outcome. The main results indicated that the area under curve (AUC) of the HSROC was 0.87 (0.84–0.90) and ML algorithm exhibited a strong specificity, 95% confidence interval and heterogeneity (I(2)) of (0.87, 0.84–0.90, [I(2) 99.0%]) and a weak sensitivity of (0.68, 0.58–0.77, [I(2) 99.7%]) in predicting kidney disease deterioration. And the the results of subgroup analysis indicated that ML algorithm’s AUC for predicting CKD prognosis was 0.82 (0.79–0.85), with the pool sensitivity of (0.64, 0.49–0.77, [I(2) 99.20%]) and pool specificity of (0.84, 0.74–0.91, [I(2) 99.84%]). The ML algorithm’s AUC for predicting IgA nephropathy prognosis was 0.78 (0.74–0.81), with the pool sensitivity of (0.74, 0.71–0.77, [I(2) 7.10%]) and pool specificity of (0.93, 0.91–0.95, [I(2) 83.92%]). CONCLUSION: Taking advantage of big data, ML algorithm-based prediction models have high accuracy in predicting kidney disease progression, we recommend ML algorithms as an auxiliary tool for clinicians to determine proper treatment and disease management strategies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-01951-1. BioMed Central 2022-08-01 /pmc/articles/PMC9341041/ /pubmed/35915457 http://dx.doi.org/10.1186/s12911-022-01951-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Lei, Nuo
Zhang, Xianlong
Wei, Mengting
Lao, Beini
Xu, Xueyi
Zhang, Min
Chen, Huifen
Xu, Yanmin
Xia, Bingqing
Zhang, Dingjun
Dong, Chendi
Fu, Lizhe
Tang, Fang
Wu, Yifan
Machine learning algorithms’ accuracy in predicting kidney disease progression: a systematic review and meta-analysis
title Machine learning algorithms’ accuracy in predicting kidney disease progression: a systematic review and meta-analysis
title_full Machine learning algorithms’ accuracy in predicting kidney disease progression: a systematic review and meta-analysis
title_fullStr Machine learning algorithms’ accuracy in predicting kidney disease progression: a systematic review and meta-analysis
title_full_unstemmed Machine learning algorithms’ accuracy in predicting kidney disease progression: a systematic review and meta-analysis
title_short Machine learning algorithms’ accuracy in predicting kidney disease progression: a systematic review and meta-analysis
title_sort machine learning algorithms’ accuracy in predicting kidney disease progression: a systematic review and meta-analysis
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9341041/
https://www.ncbi.nlm.nih.gov/pubmed/35915457
http://dx.doi.org/10.1186/s12911-022-01951-1
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