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Role of Genetic Polymorphisms in IL12Rβ2 in Chronic Obstructive Pulmonary Disease

BACKGROUND: Chronic obstructive pulmonary disease (COPD) is the most common chronic inflammatory airway disease. Il-12r beta 2 (IL-12Rβ2) is important for the production of pathogenic Th1 cells. We aimed to explore the association between IL-12Rβ2 genetic variants and COPD risk among southern Chines...

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Autores principales: Fu, Yihui, Liu, Lirong, Wu, Haihong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9342432/
https://www.ncbi.nlm.nih.gov/pubmed/35923356
http://dx.doi.org/10.2147/COPD.S366844
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author Fu, Yihui
Liu, Lirong
Wu, Haihong
author_facet Fu, Yihui
Liu, Lirong
Wu, Haihong
author_sort Fu, Yihui
collection PubMed
description BACKGROUND: Chronic obstructive pulmonary disease (COPD) is the most common chronic inflammatory airway disease. Il-12r beta 2 (IL-12Rβ2) is important for the production of pathogenic Th1 cells. We aimed to explore the association between IL-12Rβ2 genetic variants and COPD risk among southern Chinese Han population. METHODS: We recruited 996 participants to perform an association analysis through SNPStats online software. We used false-positive report probability analysis to detect whether the positive findings were noteworthy. Haploview 4.2 software and SNPStats were used to conduct the haplotype analysis and linkage disequilibrium. Finally, the interaction of SNP-SNP in COPD risk was evaluated by multi-factor dimensionality reduction. RESULTS: The study found evidence that genetic loci in IL-12Rβ2 (rs2201584, rs1874791, rs6679356, and rs3790567) were potentially associated with the COPD susceptibility. In particular, IL-12Rβ2-rs2201584 and -rs1874791 showed close associations with COPD risk in both overall and several stratified analyses. Overall analysis or several stratified analyses indicated that allele A or homozygous genotype AA of IL-12Rβ2-rs2201584 were risk factors for COPD (Allele A: OR (95% CI) = 1.23 (1.02–1.48), p = 0.033; genotype AA: OR (95% CI) = 1.76 (1.15–2.69), p = 0.009). The allele A or homozygous genotype AA of IL-12Rβ2- rs1874791 were also risk factors for COPD (Allele A: OR (95% CI) = 1.36 (1.10–1.68), p = 0.004; genotype AA: OR (95% CI) = 2.17 (1.18–3.99), p = 0.013). CONCLUSION: Intronic variants in IL-12Rβ2 (rs2201584, rs1874791, rs6679356, and rs3790567) were associated with the COPD susceptibility. In particular, there were sufficient evidences that IL-12Rβ2-rs2201584 and -rs1874791 were associated with the increasing risk of COPD.
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spelling pubmed-93424322022-08-02 Role of Genetic Polymorphisms in IL12Rβ2 in Chronic Obstructive Pulmonary Disease Fu, Yihui Liu, Lirong Wu, Haihong Int J Chron Obstruct Pulmon Dis Original Research BACKGROUND: Chronic obstructive pulmonary disease (COPD) is the most common chronic inflammatory airway disease. Il-12r beta 2 (IL-12Rβ2) is important for the production of pathogenic Th1 cells. We aimed to explore the association between IL-12Rβ2 genetic variants and COPD risk among southern Chinese Han population. METHODS: We recruited 996 participants to perform an association analysis through SNPStats online software. We used false-positive report probability analysis to detect whether the positive findings were noteworthy. Haploview 4.2 software and SNPStats were used to conduct the haplotype analysis and linkage disequilibrium. Finally, the interaction of SNP-SNP in COPD risk was evaluated by multi-factor dimensionality reduction. RESULTS: The study found evidence that genetic loci in IL-12Rβ2 (rs2201584, rs1874791, rs6679356, and rs3790567) were potentially associated with the COPD susceptibility. In particular, IL-12Rβ2-rs2201584 and -rs1874791 showed close associations with COPD risk in both overall and several stratified analyses. Overall analysis or several stratified analyses indicated that allele A or homozygous genotype AA of IL-12Rβ2-rs2201584 were risk factors for COPD (Allele A: OR (95% CI) = 1.23 (1.02–1.48), p = 0.033; genotype AA: OR (95% CI) = 1.76 (1.15–2.69), p = 0.009). The allele A or homozygous genotype AA of IL-12Rβ2- rs1874791 were also risk factors for COPD (Allele A: OR (95% CI) = 1.36 (1.10–1.68), p = 0.004; genotype AA: OR (95% CI) = 2.17 (1.18–3.99), p = 0.013). CONCLUSION: Intronic variants in IL-12Rβ2 (rs2201584, rs1874791, rs6679356, and rs3790567) were associated with the COPD susceptibility. In particular, there were sufficient evidences that IL-12Rβ2-rs2201584 and -rs1874791 were associated with the increasing risk of COPD. Dove 2022-07-27 /pmc/articles/PMC9342432/ /pubmed/35923356 http://dx.doi.org/10.2147/COPD.S366844 Text en © 2022 Fu et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Fu, Yihui
Liu, Lirong
Wu, Haihong
Role of Genetic Polymorphisms in IL12Rβ2 in Chronic Obstructive Pulmonary Disease
title Role of Genetic Polymorphisms in IL12Rβ2 in Chronic Obstructive Pulmonary Disease
title_full Role of Genetic Polymorphisms in IL12Rβ2 in Chronic Obstructive Pulmonary Disease
title_fullStr Role of Genetic Polymorphisms in IL12Rβ2 in Chronic Obstructive Pulmonary Disease
title_full_unstemmed Role of Genetic Polymorphisms in IL12Rβ2 in Chronic Obstructive Pulmonary Disease
title_short Role of Genetic Polymorphisms in IL12Rβ2 in Chronic Obstructive Pulmonary Disease
title_sort role of genetic polymorphisms in il12rβ2 in chronic obstructive pulmonary disease
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9342432/
https://www.ncbi.nlm.nih.gov/pubmed/35923356
http://dx.doi.org/10.2147/COPD.S366844
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