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Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine
BACKGROUND: Psoriasis is a recurrent, chronic, inflammation- and immune-mediated skin disease with multiple causative factors. However, the genetic markers associated with recurrence have not yet been fully elucidated. Accordingly, in this study, we aimed to identify markers associated with the recu...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9343179/ https://www.ncbi.nlm.nih.gov/pubmed/35924255 http://dx.doi.org/10.2147/CCID.S378143 |
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author | Li, An-Hai Li, Wen-Wen Yu, Xiao-Qian Zhang, Dai-Ming Liu, Yi-Ran Li, Ding |
author_facet | Li, An-Hai Li, Wen-Wen Yu, Xiao-Qian Zhang, Dai-Ming Liu, Yi-Ran Li, Ding |
author_sort | Li, An-Hai |
collection | PubMed |
description | BACKGROUND: Psoriasis is a recurrent, chronic, inflammation- and immune-mediated skin disease with multiple causative factors. However, the genetic markers associated with recurrence have not yet been fully elucidated. Accordingly, in this study, we aimed to identify markers associated with the recurrence of psoriasis. METHODS: We analyzed differentially expressed genes to determine which targets were associated with the recurrence of psoriasis and used these data to construct a protein-protein interaction network using Cytoscape software. The results were then validated by analysis of core targets using Gene Expression Omnibus (GEO) datasets and clinical samples. Functional enrichment analysis was used to explore the potential mechanisms mediating the recurrence of psoriasis. RESULTS: We screened out six core targets that played important roles in recurrence of psoriasis, and validation of GEO datasets and clinical samples showed that the expression levels of five core targets were higher in patients with psoriasis than in healthy individuals. Functional enrichment analysis revealed that the cell cycle and oocyte meiosis signaling pathways were involved in the recurrence of psoriasis. CONCLUSION: Our findings provided insights into the mechanisms mediating the onset and recurrence of psoriasis. |
format | Online Article Text |
id | pubmed-9343179 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-93431792022-08-02 Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine Li, An-Hai Li, Wen-Wen Yu, Xiao-Qian Zhang, Dai-Ming Liu, Yi-Ran Li, Ding Clin Cosmet Investig Dermatol Original Research BACKGROUND: Psoriasis is a recurrent, chronic, inflammation- and immune-mediated skin disease with multiple causative factors. However, the genetic markers associated with recurrence have not yet been fully elucidated. Accordingly, in this study, we aimed to identify markers associated with the recurrence of psoriasis. METHODS: We analyzed differentially expressed genes to determine which targets were associated with the recurrence of psoriasis and used these data to construct a protein-protein interaction network using Cytoscape software. The results were then validated by analysis of core targets using Gene Expression Omnibus (GEO) datasets and clinical samples. Functional enrichment analysis was used to explore the potential mechanisms mediating the recurrence of psoriasis. RESULTS: We screened out six core targets that played important roles in recurrence of psoriasis, and validation of GEO datasets and clinical samples showed that the expression levels of five core targets were higher in patients with psoriasis than in healthy individuals. Functional enrichment analysis revealed that the cell cycle and oocyte meiosis signaling pathways were involved in the recurrence of psoriasis. CONCLUSION: Our findings provided insights into the mechanisms mediating the onset and recurrence of psoriasis. Dove 2022-07-28 /pmc/articles/PMC9343179/ /pubmed/35924255 http://dx.doi.org/10.2147/CCID.S378143 Text en © 2022 Li et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Li, An-Hai Li, Wen-Wen Yu, Xiao-Qian Zhang, Dai-Ming Liu, Yi-Ran Li, Ding Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine |
title | Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine |
title_full | Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine |
title_fullStr | Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine |
title_full_unstemmed | Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine |
title_short | Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine |
title_sort | bioinformatic analysis and translational validation of psoriasis candidate genes for precision medicine |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9343179/ https://www.ncbi.nlm.nih.gov/pubmed/35924255 http://dx.doi.org/10.2147/CCID.S378143 |
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