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Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine

BACKGROUND: Psoriasis is a recurrent, chronic, inflammation- and immune-mediated skin disease with multiple causative factors. However, the genetic markers associated with recurrence have not yet been fully elucidated. Accordingly, in this study, we aimed to identify markers associated with the recu...

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Autores principales: Li, An-Hai, Li, Wen-Wen, Yu, Xiao-Qian, Zhang, Dai-Ming, Liu, Yi-Ran, Li, Ding
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9343179/
https://www.ncbi.nlm.nih.gov/pubmed/35924255
http://dx.doi.org/10.2147/CCID.S378143
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author Li, An-Hai
Li, Wen-Wen
Yu, Xiao-Qian
Zhang, Dai-Ming
Liu, Yi-Ran
Li, Ding
author_facet Li, An-Hai
Li, Wen-Wen
Yu, Xiao-Qian
Zhang, Dai-Ming
Liu, Yi-Ran
Li, Ding
author_sort Li, An-Hai
collection PubMed
description BACKGROUND: Psoriasis is a recurrent, chronic, inflammation- and immune-mediated skin disease with multiple causative factors. However, the genetic markers associated with recurrence have not yet been fully elucidated. Accordingly, in this study, we aimed to identify markers associated with the recurrence of psoriasis. METHODS: We analyzed differentially expressed genes to determine which targets were associated with the recurrence of psoriasis and used these data to construct a protein-protein interaction network using Cytoscape software. The results were then validated by analysis of core targets using Gene Expression Omnibus (GEO) datasets and clinical samples. Functional enrichment analysis was used to explore the potential mechanisms mediating the recurrence of psoriasis. RESULTS: We screened out six core targets that played important roles in recurrence of psoriasis, and validation of GEO datasets and clinical samples showed that the expression levels of five core targets were higher in patients with psoriasis than in healthy individuals. Functional enrichment analysis revealed that the cell cycle and oocyte meiosis signaling pathways were involved in the recurrence of psoriasis. CONCLUSION: Our findings provided insights into the mechanisms mediating the onset and recurrence of psoriasis.
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spelling pubmed-93431792022-08-02 Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine Li, An-Hai Li, Wen-Wen Yu, Xiao-Qian Zhang, Dai-Ming Liu, Yi-Ran Li, Ding Clin Cosmet Investig Dermatol Original Research BACKGROUND: Psoriasis is a recurrent, chronic, inflammation- and immune-mediated skin disease with multiple causative factors. However, the genetic markers associated with recurrence have not yet been fully elucidated. Accordingly, in this study, we aimed to identify markers associated with the recurrence of psoriasis. METHODS: We analyzed differentially expressed genes to determine which targets were associated with the recurrence of psoriasis and used these data to construct a protein-protein interaction network using Cytoscape software. The results were then validated by analysis of core targets using Gene Expression Omnibus (GEO) datasets and clinical samples. Functional enrichment analysis was used to explore the potential mechanisms mediating the recurrence of psoriasis. RESULTS: We screened out six core targets that played important roles in recurrence of psoriasis, and validation of GEO datasets and clinical samples showed that the expression levels of five core targets were higher in patients with psoriasis than in healthy individuals. Functional enrichment analysis revealed that the cell cycle and oocyte meiosis signaling pathways were involved in the recurrence of psoriasis. CONCLUSION: Our findings provided insights into the mechanisms mediating the onset and recurrence of psoriasis. Dove 2022-07-28 /pmc/articles/PMC9343179/ /pubmed/35924255 http://dx.doi.org/10.2147/CCID.S378143 Text en © 2022 Li et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Li, An-Hai
Li, Wen-Wen
Yu, Xiao-Qian
Zhang, Dai-Ming
Liu, Yi-Ran
Li, Ding
Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine
title Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine
title_full Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine
title_fullStr Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine
title_full_unstemmed Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine
title_short Bioinformatic Analysis and Translational Validation of Psoriasis Candidate Genes for Precision Medicine
title_sort bioinformatic analysis and translational validation of psoriasis candidate genes for precision medicine
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9343179/
https://www.ncbi.nlm.nih.gov/pubmed/35924255
http://dx.doi.org/10.2147/CCID.S378143
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