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Physiological and Differential Proteomic Analysis at Seedling Stage by Induction of Heavy-Ion Beam Radiation in Wheat Seeds

Novel genetic variations can be obtained by inducing mutations in the plant which help to achieve novel traits. The useful mutant can be obtained through radiation mutation in a short period which can be used as a new material to produce new varieties with high yield and good quality wheat. In this...

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Autores principales: Li, Yuqi, Gu, Jiayu, Irshad, Ahsan, Zhao, Linshu, Guo, Huijun, Xiong, Hongchun, Xie, Yongdun, Zhao, Shirong, Ding, Yuping, Zhou, Libin, Kong, Fuquan, Fang, Zhengwu, Liu, Luxiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9343878/
https://www.ncbi.nlm.nih.gov/pubmed/35928451
http://dx.doi.org/10.3389/fgene.2022.942806
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author Li, Yuqi
Gu, Jiayu
Irshad, Ahsan
Zhao, Linshu
Guo, Huijun
Xiong, Hongchun
Xie, Yongdun
Zhao, Shirong
Ding, Yuping
Zhou, Libin
Kong, Fuquan
Fang, Zhengwu
Liu, Luxiang
author_facet Li, Yuqi
Gu, Jiayu
Irshad, Ahsan
Zhao, Linshu
Guo, Huijun
Xiong, Hongchun
Xie, Yongdun
Zhao, Shirong
Ding, Yuping
Zhou, Libin
Kong, Fuquan
Fang, Zhengwu
Liu, Luxiang
author_sort Li, Yuqi
collection PubMed
description Novel genetic variations can be obtained by inducing mutations in the plant which help to achieve novel traits. The useful mutant can be obtained through radiation mutation in a short period which can be used as a new material to produce new varieties with high yield and good quality wheat. In this paper, the proteomic analysis of wheat treated with different doses of (12)C and (7)Li ion beam radiation at the seedling stage was carried out through a Tandem Mass Tag (TMT) tagging quantitative proteomic analysis platform based on high-resolution liquid chromatography-mass spectrometry, and the traditional (60)Co-γ-ray radiation treatment for reference. A total of 4,764 up-regulated and 5,542 down-regulated differentially expressed proteins were identified. These proteins were mainly enriched in the KEGG pathway associated with amino acid metabolism, fatty acid metabolism, carbon metabolism, photosynthesis, signal transduction, protein synthesis, and DNA replication. Functional analysis of the differentially expressed proteins showed that the oxidative defense system in the plant defense system was fully involved in the defense response after (12)C ion beam and (7)Li ion beam radiation treatments. Photosynthesis and photorespiration were inhibited after (12)C ion beam and (60)Co-γ-ray irradiation treatments, while there was no effect on the plant with (7)Li ion beam treatment. In addition, the synthesis of biomolecules such as proteins, as well as multiple signal transduction pathways also respond to radiations. Some selected differentially expressed proteins were verified by Parallel Reaction Monitoring (PRM) and qPCR, and the experimental results were consistent with the quantitative results of TMT. The present study shows that the physiological effect of (12)C ion beam radiation treatment is different as compared to the (7)Li ion beam, but its similar to the (60)Co-γ ray depicting a significant effect on the plant by using the same dose. The results of this study will provide a theoretical basis for the application of (12)C and (7)Li ion beam radiation in the mutation breeding of wheat and other major crops and promote the development of heavy ion beam radiation mutation breeding technology.
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spelling pubmed-93438782022-08-03 Physiological and Differential Proteomic Analysis at Seedling Stage by Induction of Heavy-Ion Beam Radiation in Wheat Seeds Li, Yuqi Gu, Jiayu Irshad, Ahsan Zhao, Linshu Guo, Huijun Xiong, Hongchun Xie, Yongdun Zhao, Shirong Ding, Yuping Zhou, Libin Kong, Fuquan Fang, Zhengwu Liu, Luxiang Front Genet Genetics Novel genetic variations can be obtained by inducing mutations in the plant which help to achieve novel traits. The useful mutant can be obtained through radiation mutation in a short period which can be used as a new material to produce new varieties with high yield and good quality wheat. In this paper, the proteomic analysis of wheat treated with different doses of (12)C and (7)Li ion beam radiation at the seedling stage was carried out through a Tandem Mass Tag (TMT) tagging quantitative proteomic analysis platform based on high-resolution liquid chromatography-mass spectrometry, and the traditional (60)Co-γ-ray radiation treatment for reference. A total of 4,764 up-regulated and 5,542 down-regulated differentially expressed proteins were identified. These proteins were mainly enriched in the KEGG pathway associated with amino acid metabolism, fatty acid metabolism, carbon metabolism, photosynthesis, signal transduction, protein synthesis, and DNA replication. Functional analysis of the differentially expressed proteins showed that the oxidative defense system in the plant defense system was fully involved in the defense response after (12)C ion beam and (7)Li ion beam radiation treatments. Photosynthesis and photorespiration were inhibited after (12)C ion beam and (60)Co-γ-ray irradiation treatments, while there was no effect on the plant with (7)Li ion beam treatment. In addition, the synthesis of biomolecules such as proteins, as well as multiple signal transduction pathways also respond to radiations. Some selected differentially expressed proteins were verified by Parallel Reaction Monitoring (PRM) and qPCR, and the experimental results were consistent with the quantitative results of TMT. The present study shows that the physiological effect of (12)C ion beam radiation treatment is different as compared to the (7)Li ion beam, but its similar to the (60)Co-γ ray depicting a significant effect on the plant by using the same dose. The results of this study will provide a theoretical basis for the application of (12)C and (7)Li ion beam radiation in the mutation breeding of wheat and other major crops and promote the development of heavy ion beam radiation mutation breeding technology. Frontiers Media S.A. 2022-07-19 /pmc/articles/PMC9343878/ /pubmed/35928451 http://dx.doi.org/10.3389/fgene.2022.942806 Text en Copyright © 2022 Li, Gu, Irshad, Zhao, Guo, Xiong, Xie, Zhao, Ding, Zhou, Kong, Fang and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Li, Yuqi
Gu, Jiayu
Irshad, Ahsan
Zhao, Linshu
Guo, Huijun
Xiong, Hongchun
Xie, Yongdun
Zhao, Shirong
Ding, Yuping
Zhou, Libin
Kong, Fuquan
Fang, Zhengwu
Liu, Luxiang
Physiological and Differential Proteomic Analysis at Seedling Stage by Induction of Heavy-Ion Beam Radiation in Wheat Seeds
title Physiological and Differential Proteomic Analysis at Seedling Stage by Induction of Heavy-Ion Beam Radiation in Wheat Seeds
title_full Physiological and Differential Proteomic Analysis at Seedling Stage by Induction of Heavy-Ion Beam Radiation in Wheat Seeds
title_fullStr Physiological and Differential Proteomic Analysis at Seedling Stage by Induction of Heavy-Ion Beam Radiation in Wheat Seeds
title_full_unstemmed Physiological and Differential Proteomic Analysis at Seedling Stage by Induction of Heavy-Ion Beam Radiation in Wheat Seeds
title_short Physiological and Differential Proteomic Analysis at Seedling Stage by Induction of Heavy-Ion Beam Radiation in Wheat Seeds
title_sort physiological and differential proteomic analysis at seedling stage by induction of heavy-ion beam radiation in wheat seeds
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9343878/
https://www.ncbi.nlm.nih.gov/pubmed/35928451
http://dx.doi.org/10.3389/fgene.2022.942806
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