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Screening differential circular RNAs expression profiles in Vulvar Lichen Sclerosus

BACKGROUND: Vulvar lichen sclerosus (VLS) is one of the most common clinical manifestations of vulva. Thirteen percent of women have symptomatic vulvar diseases. The aim of this study is to investigate the expression profile of circular RNA (circRNAs) in vulvar lichen sclerosus, and to identify the...

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Autores principales: Yang, Min, Sun, Kailv, Chang, Jianmin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9344620/
https://www.ncbi.nlm.nih.gov/pubmed/35915455
http://dx.doi.org/10.1186/s12938-022-01013-7
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author Yang, Min
Sun, Kailv
Chang, Jianmin
author_facet Yang, Min
Sun, Kailv
Chang, Jianmin
author_sort Yang, Min
collection PubMed
description BACKGROUND: Vulvar lichen sclerosus (VLS) is one of the most common clinical manifestations of vulva. Thirteen percent of women have symptomatic vulvar diseases. The aim of this study is to investigate the expression profile of circular RNA (circRNAs) in vulvar lichen sclerosus, and to identify the underlying core genes of VLS. METHODS: We removed rRNA for sequencing, and screened the differentially expressed messenger RNA (mRNAs), long non-coding RNA (lncRNAs) and single-stranded circRNA in 20 groups of VLS tissues and 20 groups of healthy female vulvar skin tissues. Bioinformatics analysis was used to analyze its potential functions. RESULTS: A total of 2545 differentially expressed mRNAs were assessed in VLS patients, of which 1541 samples were up-regulated and 1004 samples were down-regulated. A total of 1453 differentially expressed lncRNAs were assessed, of which 812 samples were up-regulated and 641 samples were down-regulated. A total of 79 differentially expressed circRNAs were assessed, of which 54 were up-regulated and 25 were down-regulated. The differential expression of circRNAs was closely related to biological processes and molecular functions. The differences in circRNAs were mainly related to the “human T-cell leukemia virus 1 infection” signaling pathway and the “axon guidance” signaling pathway. CONCLUSION: The profile of abnormal regulation of circRNA exists in VLS. According to biological informatics analysis, the dysregulation of circRNAs may be related to the pathogenesis and pathological process of VLS. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12938-022-01013-7.
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spelling pubmed-93446202022-08-03 Screening differential circular RNAs expression profiles in Vulvar Lichen Sclerosus Yang, Min Sun, Kailv Chang, Jianmin Biomed Eng Online Research BACKGROUND: Vulvar lichen sclerosus (VLS) is one of the most common clinical manifestations of vulva. Thirteen percent of women have symptomatic vulvar diseases. The aim of this study is to investigate the expression profile of circular RNA (circRNAs) in vulvar lichen sclerosus, and to identify the underlying core genes of VLS. METHODS: We removed rRNA for sequencing, and screened the differentially expressed messenger RNA (mRNAs), long non-coding RNA (lncRNAs) and single-stranded circRNA in 20 groups of VLS tissues and 20 groups of healthy female vulvar skin tissues. Bioinformatics analysis was used to analyze its potential functions. RESULTS: A total of 2545 differentially expressed mRNAs were assessed in VLS patients, of which 1541 samples were up-regulated and 1004 samples were down-regulated. A total of 1453 differentially expressed lncRNAs were assessed, of which 812 samples were up-regulated and 641 samples were down-regulated. A total of 79 differentially expressed circRNAs were assessed, of which 54 were up-regulated and 25 were down-regulated. The differential expression of circRNAs was closely related to biological processes and molecular functions. The differences in circRNAs were mainly related to the “human T-cell leukemia virus 1 infection” signaling pathway and the “axon guidance” signaling pathway. CONCLUSION: The profile of abnormal regulation of circRNA exists in VLS. According to biological informatics analysis, the dysregulation of circRNAs may be related to the pathogenesis and pathological process of VLS. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12938-022-01013-7. BioMed Central 2022-08-01 /pmc/articles/PMC9344620/ /pubmed/35915455 http://dx.doi.org/10.1186/s12938-022-01013-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Yang, Min
Sun, Kailv
Chang, Jianmin
Screening differential circular RNAs expression profiles in Vulvar Lichen Sclerosus
title Screening differential circular RNAs expression profiles in Vulvar Lichen Sclerosus
title_full Screening differential circular RNAs expression profiles in Vulvar Lichen Sclerosus
title_fullStr Screening differential circular RNAs expression profiles in Vulvar Lichen Sclerosus
title_full_unstemmed Screening differential circular RNAs expression profiles in Vulvar Lichen Sclerosus
title_short Screening differential circular RNAs expression profiles in Vulvar Lichen Sclerosus
title_sort screening differential circular rnas expression profiles in vulvar lichen sclerosus
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9344620/
https://www.ncbi.nlm.nih.gov/pubmed/35915455
http://dx.doi.org/10.1186/s12938-022-01013-7
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