Cargando…
Genetic algorithm based image reconstruction applying the digital holography process with the Discrete Orthonormal Stockwell Transform technique for diagnosis of COVID-19
World Health Organization has described the real-time reverse transcription-polymerase chain reaction test method for the diagnosis of the novel coronavirus disease (COVID-19). However, the limited number of test kits, the long-term results of the tests, the high probability of the disease spreading...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Ltd.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9344740/ https://www.ncbi.nlm.nih.gov/pubmed/35961086 http://dx.doi.org/10.1016/j.compbiomed.2022.105934 |
_version_ | 1784761283036315648 |
---|---|
author | Ustabaş Kaya, Gülhan Onur, Tuğba Özge |
author_facet | Ustabaş Kaya, Gülhan Onur, Tuğba Özge |
author_sort | Ustabaş Kaya, Gülhan |
collection | PubMed |
description | World Health Organization has described the real-time reverse transcription-polymerase chain reaction test method for the diagnosis of the novel coronavirus disease (COVID-19). However, the limited number of test kits, the long-term results of the tests, the high probability of the disease spreading during the test and imaging without focused images necessitate the use of alternative diagnostic methods such as chest X-ray (CXR) imaging. The storage of data obtained for the diagnosis of the disease also poses a major problem. This causes misdiagnosis and delays treatment. In this work, we propose a hybrid 3D reconstruction method of CXR images (CXRI) to detect coronavirus pneumonia and prevent misdiagnosis on CXRI. We used the digital holography technique (DHT) for obtaining a priori information of CXRI stored in created digital hologram (CDH). In this way, the elimination of the storage problem that requires high space was revealed. In addition, Discrete Orthonormal S-Transform (DOST) is applied to the reconstructed CDH image obtained by using DHT. This method is called CDH_DHT_DOST. A multiresolution spatial-frequency representation of the lung images that belong to healthy people and diseased people with the COVID-19 virus is obtained by using the CDH_DHT_DOST. Moreover, the genetic algorithm (GA) is adopted for the reconstruction process for optimization of the CDH image and then DOST is applied. This hybrid method is called CDH_GA_DOST. Finally, we compare the results obtained from CDH_DHT_DOST and CDH_GA_DOST. The results show the feasibility of reconstructing CXRI with CDH_GA_DOST. The proposed method holds promises to meet demands for the detection of the COVID-19 virus. |
format | Online Article Text |
id | pubmed-9344740 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93447402022-08-02 Genetic algorithm based image reconstruction applying the digital holography process with the Discrete Orthonormal Stockwell Transform technique for diagnosis of COVID-19 Ustabaş Kaya, Gülhan Onur, Tuğba Özge Comput Biol Med Article World Health Organization has described the real-time reverse transcription-polymerase chain reaction test method for the diagnosis of the novel coronavirus disease (COVID-19). However, the limited number of test kits, the long-term results of the tests, the high probability of the disease spreading during the test and imaging without focused images necessitate the use of alternative diagnostic methods such as chest X-ray (CXR) imaging. The storage of data obtained for the diagnosis of the disease also poses a major problem. This causes misdiagnosis and delays treatment. In this work, we propose a hybrid 3D reconstruction method of CXR images (CXRI) to detect coronavirus pneumonia and prevent misdiagnosis on CXRI. We used the digital holography technique (DHT) for obtaining a priori information of CXRI stored in created digital hologram (CDH). In this way, the elimination of the storage problem that requires high space was revealed. In addition, Discrete Orthonormal S-Transform (DOST) is applied to the reconstructed CDH image obtained by using DHT. This method is called CDH_DHT_DOST. A multiresolution spatial-frequency representation of the lung images that belong to healthy people and diseased people with the COVID-19 virus is obtained by using the CDH_DHT_DOST. Moreover, the genetic algorithm (GA) is adopted for the reconstruction process for optimization of the CDH image and then DOST is applied. This hybrid method is called CDH_GA_DOST. Finally, we compare the results obtained from CDH_DHT_DOST and CDH_GA_DOST. The results show the feasibility of reconstructing CXRI with CDH_GA_DOST. The proposed method holds promises to meet demands for the detection of the COVID-19 virus. Elsevier Ltd. 2022-09 2022-08-02 /pmc/articles/PMC9344740/ /pubmed/35961086 http://dx.doi.org/10.1016/j.compbiomed.2022.105934 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Ustabaş Kaya, Gülhan Onur, Tuğba Özge Genetic algorithm based image reconstruction applying the digital holography process with the Discrete Orthonormal Stockwell Transform technique for diagnosis of COVID-19 |
title | Genetic algorithm based image reconstruction applying the digital holography process with the Discrete Orthonormal Stockwell Transform technique for diagnosis of COVID-19 |
title_full | Genetic algorithm based image reconstruction applying the digital holography process with the Discrete Orthonormal Stockwell Transform technique for diagnosis of COVID-19 |
title_fullStr | Genetic algorithm based image reconstruction applying the digital holography process with the Discrete Orthonormal Stockwell Transform technique for diagnosis of COVID-19 |
title_full_unstemmed | Genetic algorithm based image reconstruction applying the digital holography process with the Discrete Orthonormal Stockwell Transform technique for diagnosis of COVID-19 |
title_short | Genetic algorithm based image reconstruction applying the digital holography process with the Discrete Orthonormal Stockwell Transform technique for diagnosis of COVID-19 |
title_sort | genetic algorithm based image reconstruction applying the digital holography process with the discrete orthonormal stockwell transform technique for diagnosis of covid-19 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9344740/ https://www.ncbi.nlm.nih.gov/pubmed/35961086 http://dx.doi.org/10.1016/j.compbiomed.2022.105934 |
work_keys_str_mv | AT ustabaskayagulhan geneticalgorithmbasedimagereconstructionapplyingthedigitalholographyprocesswiththediscreteorthonormalstockwelltransformtechniquefordiagnosisofcovid19 AT onurtugbaozge geneticalgorithmbasedimagereconstructionapplyingthedigitalholographyprocesswiththediscreteorthonormalstockwelltransformtechniquefordiagnosisofcovid19 |