Cargando…

Application of the sliding window method and Mask-RCNN method to nuclear recognition in oral cytology

BACKGROUND: We aimed to develop an artificial intelligence (AI)-assisted oral cytology method, similar to cervical cytology. We focused on the detection of cell nuclei because the ratio of cell nuclei to cytoplasm increases with increasing cell malignancy. As an initial step in the development of AI...

Descripción completa

Detalles Bibliográficos
Autores principales: Mitate, Eiji, Inoue, Kirin, Sato, Retsushi, Shimomoto, Youichi, Ohba, Seigo, Ogata, Kinuko, Sakai, Tomoya, Ohno, Jun, Yamamoto, Ikuo, Asahina, Izumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9344779/
https://www.ncbi.nlm.nih.gov/pubmed/35918750
http://dx.doi.org/10.1186/s13000-022-01245-0
_version_ 1784761290003054592
author Mitate, Eiji
Inoue, Kirin
Sato, Retsushi
Shimomoto, Youichi
Ohba, Seigo
Ogata, Kinuko
Sakai, Tomoya
Ohno, Jun
Yamamoto, Ikuo
Asahina, Izumi
author_facet Mitate, Eiji
Inoue, Kirin
Sato, Retsushi
Shimomoto, Youichi
Ohba, Seigo
Ogata, Kinuko
Sakai, Tomoya
Ohno, Jun
Yamamoto, Ikuo
Asahina, Izumi
author_sort Mitate, Eiji
collection PubMed
description BACKGROUND: We aimed to develop an artificial intelligence (AI)-assisted oral cytology method, similar to cervical cytology. We focused on the detection of cell nuclei because the ratio of cell nuclei to cytoplasm increases with increasing cell malignancy. As an initial step in the development of AI-assisted cytology, we investigated two methods for the automatic detection of cell nuclei in blue-stained cells in cytopreparation images. METHODS: We evaluated the usefulness of the sliding window method (SWM) and mask region-based convolutional neural network (Mask-RCNN) in identifying the cell nuclei in oral cytopreparation images. Thirty cases of liquid-based oral cytology were analyzed. First, we performed the SWM by dividing each image into 96 × 96 pixels. Overall, 591 images with or without blue-stained cell nuclei were prepared as the training data and 197 as the test data (total: 1,576 images). Next, we performed the Mask-RCNN by preparing 130 images of Class II and III lesions and creating mask images showing cell regions based on these images. RESULTS: Using the SWM method, the highest detection rate for blue-stained cells in the evaluation group was 0.9314. For Mask-RCNN, 37 cell nuclei were identified, and 1 cell nucleus was identified as a non-nucleus after 40 epochs (error rate:0.027). CONCLUSIONS: Mask-RCNN is more accurate than SWM in identifying the cell nuclei. If the blue-stained cell nuclei can be correctly identified automatically, the entire cell morphology can be grasped faster, and the diagnostic performance of cytology can be improved.
format Online
Article
Text
id pubmed-9344779
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-93447792022-08-03 Application of the sliding window method and Mask-RCNN method to nuclear recognition in oral cytology Mitate, Eiji Inoue, Kirin Sato, Retsushi Shimomoto, Youichi Ohba, Seigo Ogata, Kinuko Sakai, Tomoya Ohno, Jun Yamamoto, Ikuo Asahina, Izumi Diagn Pathol Research BACKGROUND: We aimed to develop an artificial intelligence (AI)-assisted oral cytology method, similar to cervical cytology. We focused on the detection of cell nuclei because the ratio of cell nuclei to cytoplasm increases with increasing cell malignancy. As an initial step in the development of AI-assisted cytology, we investigated two methods for the automatic detection of cell nuclei in blue-stained cells in cytopreparation images. METHODS: We evaluated the usefulness of the sliding window method (SWM) and mask region-based convolutional neural network (Mask-RCNN) in identifying the cell nuclei in oral cytopreparation images. Thirty cases of liquid-based oral cytology were analyzed. First, we performed the SWM by dividing each image into 96 × 96 pixels. Overall, 591 images with or without blue-stained cell nuclei were prepared as the training data and 197 as the test data (total: 1,576 images). Next, we performed the Mask-RCNN by preparing 130 images of Class II and III lesions and creating mask images showing cell regions based on these images. RESULTS: Using the SWM method, the highest detection rate for blue-stained cells in the evaluation group was 0.9314. For Mask-RCNN, 37 cell nuclei were identified, and 1 cell nucleus was identified as a non-nucleus after 40 epochs (error rate:0.027). CONCLUSIONS: Mask-RCNN is more accurate than SWM in identifying the cell nuclei. If the blue-stained cell nuclei can be correctly identified automatically, the entire cell morphology can be grasped faster, and the diagnostic performance of cytology can be improved. BioMed Central 2022-08-02 /pmc/articles/PMC9344779/ /pubmed/35918750 http://dx.doi.org/10.1186/s13000-022-01245-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Mitate, Eiji
Inoue, Kirin
Sato, Retsushi
Shimomoto, Youichi
Ohba, Seigo
Ogata, Kinuko
Sakai, Tomoya
Ohno, Jun
Yamamoto, Ikuo
Asahina, Izumi
Application of the sliding window method and Mask-RCNN method to nuclear recognition in oral cytology
title Application of the sliding window method and Mask-RCNN method to nuclear recognition in oral cytology
title_full Application of the sliding window method and Mask-RCNN method to nuclear recognition in oral cytology
title_fullStr Application of the sliding window method and Mask-RCNN method to nuclear recognition in oral cytology
title_full_unstemmed Application of the sliding window method and Mask-RCNN method to nuclear recognition in oral cytology
title_short Application of the sliding window method and Mask-RCNN method to nuclear recognition in oral cytology
title_sort application of the sliding window method and mask-rcnn method to nuclear recognition in oral cytology
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9344779/
https://www.ncbi.nlm.nih.gov/pubmed/35918750
http://dx.doi.org/10.1186/s13000-022-01245-0
work_keys_str_mv AT mitateeiji applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology
AT inouekirin applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology
AT satoretsushi applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology
AT shimomotoyouichi applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology
AT ohbaseigo applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology
AT ogatakinuko applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology
AT sakaitomoya applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology
AT ohnojun applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology
AT yamamotoikuo applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology
AT asahinaizumi applicationoftheslidingwindowmethodandmaskrcnnmethodtonuclearrecognitioninoralcytology