Cargando…

Robust identification of temporal biomarkers in longitudinal omics studies

MOTIVATION: Longitudinal studies increasingly collect rich ‘omics’ data sampled frequently over time and across large cohorts to capture dynamic health fluctuations and disease transitions. However, the generation of longitudinal omics data has preceded the development of analysis tools that can eff...

Descripción completa

Detalles Bibliográficos
Autores principales:	Metwally, Ahmed A, Zhang, Tom, Wu, Si, Kellogg, Ryan, Zhou, Wenyu, Contrepois, Kevin, Tang, Hua, Snyder, Michael
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2022
Materias:	Original Papers
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9344853/ https://www.ncbi.nlm.nih.gov/pubmed/35762936 http://dx.doi.org/10.1093/bioinformatics/btac403

Ejemplares similares

Deep longitudinal multiomics profiling reveals two biological seasonal patterns in California
por: Sailani, M. Reza, et al.
Publicado: (2020)

Longitudinal multi-omics of host–microbe dynamics in prediabetes
por: Zhou, Wenyu, et al.
Publicado: (2019)

PyIOmica: longitudinal omics analysis and trend identification
por: Domanskyi, Sergii, et al.
Publicado: (2020)

Omics-Based Identification of Biomarkers for Nasopharyngeal Carcinoma
por: Janvilisri, Tavan
Publicado: (2015)

-Omics biomarker identification pipeline for translational medicine
por: Bravo-Merodio, Laura, et al.
Publicado: (2019)

Optimized Analytical Procedures for the Untargeted Metabolomic Profiling of Human Urine and Plasma by Combining Hydrophilic Interaction (HILIC) and Reverse-Phase Liquid Chromatography (RPLC)–Mass Spectrometry
por: Contrepois, Kévin, et al.
Publicado: (2015)

Dynamic lipidome alterations associated with human health, disease and ageing
por: Hornburg, Daniel, et al.
Publicado: (2023)

Precision environmental health monitoring by longitudinal exposome and multi-omics profiling
por: Gao, Peng, et al.
Publicado: (2022)

Meta-Analyzing Multiple Omics Data With Robust Variable Selection
por: Hu, Zongliang, et al.
Publicado: (2021)

Biomarker signature identification in “omics” data with multi-class outcome
por: Lagani, Vincenzo, et al.
Publicado: (2013)

From transcriptional landscapes to the identification of biomarkers for robustness
por: Abee, Tjakko, et al.
Publicado: (2011)

Identification of multi-omics biomarkers and construction of the novel prognostic model for hepatocellular carcinoma
por: Liu, Xiao, et al.
Publicado: (2022)

Pathway-based biomarker identification with crosstalk analysis for robust prognosis prediction in hepatocellular carcinoma
por: Fa, Botao, et al.
Publicado: (2019)

metID: an R package for automatable compound annotation for LC−MS-based data
por: Shen, Xiaotao, et al.
Publicado: (2021)

Clustering-based COPD subtypes have distinct longitudinal outcomes and multi-omics biomarkers
por: Gregory, Andrew, et al.
Publicado: (2022)

Systematic Identification of Multi Omics-based Biomarkers in KEAP1 Mutated TCGA Lung Adenocarcinoma
por: Namani, Akhileshwar, et al.
Publicado: (2019)

Identification of early and intermediate biomarkers for ARDS mortality by multi-omic approaches
por: Liao, S. Y., et al.
Publicado: (2021)

Multi-Omics Integration for the Design of Novel Therapies and the Identification of Novel Biomarkers
por: Ivanisevic, Tonci, et al.
Publicado: (2023)

Robust and High-Throughput Analytical Flow Proteomics Analysis of Cynomolgus Monkey and Human Matrices With Zeno SWATH Data-Independent Acquisition
por: Sun, Weiwen, et al.
Publicado: (2023)

Integrative Analysis of Longitudinal Metabolomics Data from a Personal Multi-Omics Profile
por: Stanberry, Larissa, et al.
Publicado: (2013)

‘Omics’ biomarkers associated with chronic low back pain: protocol of a retrospective longitudinal study
por: Allegri, Massimo, et al.
Publicado: (2016)

Identification of robust deep neural network models of longitudinal clinical measurements
por: Javidi, Hamed, et al.
Publicado: (2022)

Identification of the expressome by machine learning on omics data
por: Sartor, Ryan C., et al.
Publicado: (2019)

Filter and Wrapper Stacking Ensemble (FWSE): a robust approach for reliable biomarker discovery in high-dimensional omics data
por: Budhraja, Sugam, et al.
Publicado: (2023)

Identification of Epigenetic Biomarkers of Lung Adenocarcinoma through Multi-Omics Data Analysis
por: Kikutake, Chie, et al.
Publicado: (2016)

Identification of biomarkers for early diagnosis of Parkinson's disease by multi-omics joint analysis
por: Hu, Chaokai, et al.
Publicado: (2020)

Identification of Pan-Cancer Prognostic Biomarkers Through Integration of Multi-Omics Data
por: Zhao, Ning, et al.
Publicado: (2020)

Identification of novel prognostic biomarkers by integrating multi-omics data in gastric cancer
por: Liu, Nannan, et al.
Publicado: (2021)

Sepsis biomarkers: an omics perspective
por: Liu, Xiao, et al.
Publicado: (2014)

A Customizable Analysis Flow in Integrative Multi-Omics
por: Lancaster, Samuel M., et al.
Publicado: (2020)

A Robust Approach for Identification of Cancer Biomarkers and Candidate Drugs
por: Shahjaman, Md., et al.
Publicado: (2019)

Editorial: Biomarker Detection Algorithms and Tools for Medical Imaging or Omics Data
por: Cho, William C., et al.
Publicado: (2022)

Temporal aspects of unrealistic optimism and robustness of this bias: A longitudinal study in the context of the COVID-19 pandemic
por: Izydorczak, Kamil, et al.
Publicado: (2022)

Editorial: Application of Omics Technologies to improve robustness and resilience in livestock species
por: Fortes, Marina Rufino Salinas, et al.
Publicado: (2023)

omicsMIC: a Comprehensive Benchmarking Platform for Robust Comparison of Imputation Methods in Mass Spectrometry-based Omics Data
por: Lin, Weiqiang, et al.
Publicado: (2023)

MOGONET integrates multi-omics data using graph convolutional networks allowing patient classification and biomarker identification
por: Wang, Tongxin, et al.
Publicado: (2021)

Identification of Diagnostic Biomarkers and Subtypes of Liver Hepatocellular Carcinoma by Multi-Omics Data Analysis
por: Ouyang, Xiao, et al.
Publicado: (2020)

Computational identification and characterization of glioma candidate biomarkers through multi-omics integrative profiling
por: Liu, Lin, et al.
Publicado: (2020)

Identification of Novel Biomarkers for Predicting Kidney Injury Due to Drugs Using “Omic” Strategies
por: Awdishu, Linda, et al.
Publicado: (2020)

Editorial: Identification of immune-related biomarkers for cancer diagnosis based on multi-omics data
por: Cheng, Liang, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_ep85m2pgdejv68v8cht0iiosl8