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Scope of repurposed drugs against the potential targets of the latest variants of SARS-CoV-2

The unprecedented outbreak of the severe acute respiratory syndrome (SARS) Coronavirus-2, across the globe, triggered a worldwide uproar in the search for immediate treatment strategies. With no specific drug and not much data available, alternative approaches such as drug repurposing came to the li...

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Autores principales: Niranjan, Vidya, Setlur, Anagha Shamsundar, Karunakaran, Chandrashekar, Uttarkar, Akshay, Kumar, Kalavathi Murugan, Skariyachan, Sinosh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346052/
https://www.ncbi.nlm.nih.gov/pubmed/35938064
http://dx.doi.org/10.1007/s11224-022-02020-z
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author Niranjan, Vidya
Setlur, Anagha Shamsundar
Karunakaran, Chandrashekar
Uttarkar, Akshay
Kumar, Kalavathi Murugan
Skariyachan, Sinosh
author_facet Niranjan, Vidya
Setlur, Anagha Shamsundar
Karunakaran, Chandrashekar
Uttarkar, Akshay
Kumar, Kalavathi Murugan
Skariyachan, Sinosh
author_sort Niranjan, Vidya
collection PubMed
description The unprecedented outbreak of the severe acute respiratory syndrome (SARS) Coronavirus-2, across the globe, triggered a worldwide uproar in the search for immediate treatment strategies. With no specific drug and not much data available, alternative approaches such as drug repurposing came to the limelight. To date, extensive research on the repositioning of drugs has led to the identification of numerous drugs against various important protein targets of the coronavirus strains, with hopes of the drugs working against the major variants of concerns (alpha, beta, gamma, delta, omicron) of the virus. Advancements in computational sciences have led to improved scope of repurposing via techniques such as structure-based approaches including molecular docking, molecular dynamic simulations and quantitative structure activity relationships, network-based approaches, and artificial intelligence-based approaches with other core machine and deep learning algorithms. This review highlights the various approaches to repurposing drugs from a computational biological perspective, with various mechanisms of action of the drugs against some of the major protein targets of SARS-CoV-2. Additionally, clinical trials data on potential COVID-19 repurposed drugs are also highlighted with stress on the major SARS-CoV-2 targets and the structural effect of variants on these targets. The interaction modelling of some important repurposed drugs has also been elucidated. Furthermore, the merits and demerits of drug repurposing are also discussed, with a focus on the scope and applications of the latest advancements in repurposing.
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spelling pubmed-93460522022-08-03 Scope of repurposed drugs against the potential targets of the latest variants of SARS-CoV-2 Niranjan, Vidya Setlur, Anagha Shamsundar Karunakaran, Chandrashekar Uttarkar, Akshay Kumar, Kalavathi Murugan Skariyachan, Sinosh Struct Chem Review Article The unprecedented outbreak of the severe acute respiratory syndrome (SARS) Coronavirus-2, across the globe, triggered a worldwide uproar in the search for immediate treatment strategies. With no specific drug and not much data available, alternative approaches such as drug repurposing came to the limelight. To date, extensive research on the repositioning of drugs has led to the identification of numerous drugs against various important protein targets of the coronavirus strains, with hopes of the drugs working against the major variants of concerns (alpha, beta, gamma, delta, omicron) of the virus. Advancements in computational sciences have led to improved scope of repurposing via techniques such as structure-based approaches including molecular docking, molecular dynamic simulations and quantitative structure activity relationships, network-based approaches, and artificial intelligence-based approaches with other core machine and deep learning algorithms. This review highlights the various approaches to repurposing drugs from a computational biological perspective, with various mechanisms of action of the drugs against some of the major protein targets of SARS-CoV-2. Additionally, clinical trials data on potential COVID-19 repurposed drugs are also highlighted with stress on the major SARS-CoV-2 targets and the structural effect of variants on these targets. The interaction modelling of some important repurposed drugs has also been elucidated. Furthermore, the merits and demerits of drug repurposing are also discussed, with a focus on the scope and applications of the latest advancements in repurposing. Springer US 2022-08-03 2022 /pmc/articles/PMC9346052/ /pubmed/35938064 http://dx.doi.org/10.1007/s11224-022-02020-z Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022, corrected publication 2022Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Review Article
Niranjan, Vidya
Setlur, Anagha Shamsundar
Karunakaran, Chandrashekar
Uttarkar, Akshay
Kumar, Kalavathi Murugan
Skariyachan, Sinosh
Scope of repurposed drugs against the potential targets of the latest variants of SARS-CoV-2
title Scope of repurposed drugs against the potential targets of the latest variants of SARS-CoV-2
title_full Scope of repurposed drugs against the potential targets of the latest variants of SARS-CoV-2
title_fullStr Scope of repurposed drugs against the potential targets of the latest variants of SARS-CoV-2
title_full_unstemmed Scope of repurposed drugs against the potential targets of the latest variants of SARS-CoV-2
title_short Scope of repurposed drugs against the potential targets of the latest variants of SARS-CoV-2
title_sort scope of repurposed drugs against the potential targets of the latest variants of sars-cov-2
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346052/
https://www.ncbi.nlm.nih.gov/pubmed/35938064
http://dx.doi.org/10.1007/s11224-022-02020-z
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