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Effective deep learning for oral exfoliative cytology classification

The use of sharpness aware minimization (SAM) as an optimizer that achieves high performance for convolutional neural networks (CNNs) is attracting attention in various fields of deep learning. We used deep learning to perform classification diagnosis in oral exfoliative cytology and to analyze perf...

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Autores principales: Sukegawa, Shintaro, Tanaka, Futa, Nakano, Keisuke, Hara, Takeshi, Yoshii, Kazumasa, Yamashita, Katsusuke, Ono, Sawako, Takabatake, Kiyofumi, Kawai, Hotaka, Nagatsuka, Hitoshi, Furuki, Yoshihiko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346110/
https://www.ncbi.nlm.nih.gov/pubmed/35918498
http://dx.doi.org/10.1038/s41598-022-17602-4
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author Sukegawa, Shintaro
Tanaka, Futa
Nakano, Keisuke
Hara, Takeshi
Yoshii, Kazumasa
Yamashita, Katsusuke
Ono, Sawako
Takabatake, Kiyofumi
Kawai, Hotaka
Nagatsuka, Hitoshi
Furuki, Yoshihiko
author_facet Sukegawa, Shintaro
Tanaka, Futa
Nakano, Keisuke
Hara, Takeshi
Yoshii, Kazumasa
Yamashita, Katsusuke
Ono, Sawako
Takabatake, Kiyofumi
Kawai, Hotaka
Nagatsuka, Hitoshi
Furuki, Yoshihiko
author_sort Sukegawa, Shintaro
collection PubMed
description The use of sharpness aware minimization (SAM) as an optimizer that achieves high performance for convolutional neural networks (CNNs) is attracting attention in various fields of deep learning. We used deep learning to perform classification diagnosis in oral exfoliative cytology and to analyze performance, using SAM as an optimization algorithm to improve classification accuracy. The whole image of the oral exfoliation cytology slide was cut into tiles and labeled by an oral pathologist. CNN was VGG16, and stochastic gradient descent (SGD) and SAM were used as optimizers. Each was analyzed with and without a learning rate scheduler in 300 epochs. The performance metrics used were accuracy, precision, recall, specificity, F1 score, AUC, and statistical and effect size. All optimizers performed better with the rate scheduler. In particular, the SAM effect size had high accuracy (11.2) and AUC (11.0). SAM had the best performance of all models with a learning rate scheduler. (AUC = 0.9328) SAM tended to suppress overfitting compared to SGD. In oral exfoliation cytology classification, CNNs using SAM rate scheduler showed the highest classification performance. These results suggest that SAM can play an important role in primary screening of the oral cytological diagnostic environment.
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spelling pubmed-93461102022-08-04 Effective deep learning for oral exfoliative cytology classification Sukegawa, Shintaro Tanaka, Futa Nakano, Keisuke Hara, Takeshi Yoshii, Kazumasa Yamashita, Katsusuke Ono, Sawako Takabatake, Kiyofumi Kawai, Hotaka Nagatsuka, Hitoshi Furuki, Yoshihiko Sci Rep Article The use of sharpness aware minimization (SAM) as an optimizer that achieves high performance for convolutional neural networks (CNNs) is attracting attention in various fields of deep learning. We used deep learning to perform classification diagnosis in oral exfoliative cytology and to analyze performance, using SAM as an optimization algorithm to improve classification accuracy. The whole image of the oral exfoliation cytology slide was cut into tiles and labeled by an oral pathologist. CNN was VGG16, and stochastic gradient descent (SGD) and SAM were used as optimizers. Each was analyzed with and without a learning rate scheduler in 300 epochs. The performance metrics used were accuracy, precision, recall, specificity, F1 score, AUC, and statistical and effect size. All optimizers performed better with the rate scheduler. In particular, the SAM effect size had high accuracy (11.2) and AUC (11.0). SAM had the best performance of all models with a learning rate scheduler. (AUC = 0.9328) SAM tended to suppress overfitting compared to SGD. In oral exfoliation cytology classification, CNNs using SAM rate scheduler showed the highest classification performance. These results suggest that SAM can play an important role in primary screening of the oral cytological diagnostic environment. Nature Publishing Group UK 2022-08-02 /pmc/articles/PMC9346110/ /pubmed/35918498 http://dx.doi.org/10.1038/s41598-022-17602-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Sukegawa, Shintaro
Tanaka, Futa
Nakano, Keisuke
Hara, Takeshi
Yoshii, Kazumasa
Yamashita, Katsusuke
Ono, Sawako
Takabatake, Kiyofumi
Kawai, Hotaka
Nagatsuka, Hitoshi
Furuki, Yoshihiko
Effective deep learning for oral exfoliative cytology classification
title Effective deep learning for oral exfoliative cytology classification
title_full Effective deep learning for oral exfoliative cytology classification
title_fullStr Effective deep learning for oral exfoliative cytology classification
title_full_unstemmed Effective deep learning for oral exfoliative cytology classification
title_short Effective deep learning for oral exfoliative cytology classification
title_sort effective deep learning for oral exfoliative cytology classification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346110/
https://www.ncbi.nlm.nih.gov/pubmed/35918498
http://dx.doi.org/10.1038/s41598-022-17602-4
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