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Potential Predictive Value of miR-125b-5p, miR-155-5p and Their Target Genes in the Course of COVID-19
PURPOSE: This study aimed to provide new biomarkers for predicting the disease course of COVID-19 by analyzing the dynamic changes of microRNA (miRNA) and its target gene expression in the serum of COVID-19 patients at different stages. METHODS: Serum samples were collected from all COVID-19 patient...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346419/ https://www.ncbi.nlm.nih.gov/pubmed/35937783 http://dx.doi.org/10.2147/IDR.S372420 |
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author | Li, Xuewen Wang, Yiting Zhou, Qi Pan, Junqi Xu, Jiancheng |
author_facet | Li, Xuewen Wang, Yiting Zhou, Qi Pan, Junqi Xu, Jiancheng |
author_sort | Li, Xuewen |
collection | PubMed |
description | PURPOSE: This study aimed to provide new biomarkers for predicting the disease course of COVID-19 by analyzing the dynamic changes of microRNA (miRNA) and its target gene expression in the serum of COVID-19 patients at different stages. METHODS: Serum samples were collected from all COVID-19 patients at three time points: the acute stage, the turn-negative stage, and the recovery stage. The expression level of miRNA and the target mRNA was measured by Quantitative Real-Time Polymerase Chain Reaction (RT-qPCR). The classification tree model was established to predict the disease course, and the prediction efficiency of independent variables in the model was analyzed using the receiver operating characteristic (ROC) curve. RESULTS: The expression of miR-125b-5p and miR-155-5p was significantly up-regulated in the acute stage and gradually decreased in the turn-negative and recovery stages. The expression of the target genes CDH5, STAT3, and TRIM32 gradually down-regulated in the acute, turn-negative, and recovery stages. MiR-125b-5p, miR-155-5p, STAT3, and TRIM32 constituted a classification tree model with 100% accuracy of prediction and AUC >0.7 for identification and prediction in all stages. CONCLUSION: MiR-125b-5p, miR-155-5p, STAT3, and TRIM32 could be useful biomarkers to predict the time nodes of the acute, turn-negative, and recovery stages of COVID-19. |
format | Online Article Text |
id | pubmed-9346419 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-93464192022-08-04 Potential Predictive Value of miR-125b-5p, miR-155-5p and Their Target Genes in the Course of COVID-19 Li, Xuewen Wang, Yiting Zhou, Qi Pan, Junqi Xu, Jiancheng Infect Drug Resist Original Research PURPOSE: This study aimed to provide new biomarkers for predicting the disease course of COVID-19 by analyzing the dynamic changes of microRNA (miRNA) and its target gene expression in the serum of COVID-19 patients at different stages. METHODS: Serum samples were collected from all COVID-19 patients at three time points: the acute stage, the turn-negative stage, and the recovery stage. The expression level of miRNA and the target mRNA was measured by Quantitative Real-Time Polymerase Chain Reaction (RT-qPCR). The classification tree model was established to predict the disease course, and the prediction efficiency of independent variables in the model was analyzed using the receiver operating characteristic (ROC) curve. RESULTS: The expression of miR-125b-5p and miR-155-5p was significantly up-regulated in the acute stage and gradually decreased in the turn-negative and recovery stages. The expression of the target genes CDH5, STAT3, and TRIM32 gradually down-regulated in the acute, turn-negative, and recovery stages. MiR-125b-5p, miR-155-5p, STAT3, and TRIM32 constituted a classification tree model with 100% accuracy of prediction and AUC >0.7 for identification and prediction in all stages. CONCLUSION: MiR-125b-5p, miR-155-5p, STAT3, and TRIM32 could be useful biomarkers to predict the time nodes of the acute, turn-negative, and recovery stages of COVID-19. Dove 2022-07-29 /pmc/articles/PMC9346419/ /pubmed/35937783 http://dx.doi.org/10.2147/IDR.S372420 Text en © 2022 Li et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Li, Xuewen Wang, Yiting Zhou, Qi Pan, Junqi Xu, Jiancheng Potential Predictive Value of miR-125b-5p, miR-155-5p and Their Target Genes in the Course of COVID-19 |
title | Potential Predictive Value of miR-125b-5p, miR-155-5p and Their Target Genes in the Course of COVID-19 |
title_full | Potential Predictive Value of miR-125b-5p, miR-155-5p and Their Target Genes in the Course of COVID-19 |
title_fullStr | Potential Predictive Value of miR-125b-5p, miR-155-5p and Their Target Genes in the Course of COVID-19 |
title_full_unstemmed | Potential Predictive Value of miR-125b-5p, miR-155-5p and Their Target Genes in the Course of COVID-19 |
title_short | Potential Predictive Value of miR-125b-5p, miR-155-5p and Their Target Genes in the Course of COVID-19 |
title_sort | potential predictive value of mir-125b-5p, mir-155-5p and their target genes in the course of covid-19 |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346419/ https://www.ncbi.nlm.nih.gov/pubmed/35937783 http://dx.doi.org/10.2147/IDR.S372420 |
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