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Development of a ladder-shape melting temperature isothermal amplification (LMTIA) assay for detection of African swine fever virus (ASFV)

BACKGROUND: Due to the unavailability of an effective vaccine or antiviral drug against the African swine fever virus (ASFV), rapid diagnosis methods are needed to prevent highly contagious African swine fever. OBJECTIVES: The objective of this study was to establish the ladder-shape melting tempera...

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Autores principales: Wang, Yongzhen, Wang, Borui, Xu, Dandan, Zhang, Meng, Zhang, Xiaohua, Wang, Deguo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society of Veterinary Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346532/
https://www.ncbi.nlm.nih.gov/pubmed/35698807
http://dx.doi.org/10.4142/jvs.22001
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author Wang, Yongzhen
Wang, Borui
Xu, Dandan
Zhang, Meng
Zhang, Xiaohua
Wang, Deguo
author_facet Wang, Yongzhen
Wang, Borui
Xu, Dandan
Zhang, Meng
Zhang, Xiaohua
Wang, Deguo
author_sort Wang, Yongzhen
collection PubMed
description BACKGROUND: Due to the unavailability of an effective vaccine or antiviral drug against the African swine fever virus (ASFV), rapid diagnosis methods are needed to prevent highly contagious African swine fever. OBJECTIVES: The objective of this study was to establish the ladder-shape melting temperature isothermal amplification (LMTIA) assay for the detection of ASFV. METHODS: LMTIA primers were designed with the p72 gene of ASFV as the target, and plasmid pUC57 was used to clone the gene. The LMTIA reaction system was optimized with the plasmid as the positive control, and the performance of the LMTIA assay was compared with that of the commercial real-time polymerase chain reaction (PCR) kit in terms of sensitivity and detection rate using 200 serum samples. RESULTS: Our results showed that the LMTIA assay could detect the 10(4) dilution of DNA extracted from the positive reference serum sample, which was the same as that of the commercial real-time PCR kit. The coincidence rate between the two assays was 100%. CONCLUSIONS: The LMTIA assay had high sensitivity, good detection, and simple operation. Thus, it is suitable for facilitating preliminary and cost-effective surveillance for the prevention and control of ASFV.
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spelling pubmed-93465322022-08-11 Development of a ladder-shape melting temperature isothermal amplification (LMTIA) assay for detection of African swine fever virus (ASFV) Wang, Yongzhen Wang, Borui Xu, Dandan Zhang, Meng Zhang, Xiaohua Wang, Deguo J Vet Sci Original Article BACKGROUND: Due to the unavailability of an effective vaccine or antiviral drug against the African swine fever virus (ASFV), rapid diagnosis methods are needed to prevent highly contagious African swine fever. OBJECTIVES: The objective of this study was to establish the ladder-shape melting temperature isothermal amplification (LMTIA) assay for the detection of ASFV. METHODS: LMTIA primers were designed with the p72 gene of ASFV as the target, and plasmid pUC57 was used to clone the gene. The LMTIA reaction system was optimized with the plasmid as the positive control, and the performance of the LMTIA assay was compared with that of the commercial real-time polymerase chain reaction (PCR) kit in terms of sensitivity and detection rate using 200 serum samples. RESULTS: Our results showed that the LMTIA assay could detect the 10(4) dilution of DNA extracted from the positive reference serum sample, which was the same as that of the commercial real-time PCR kit. The coincidence rate between the two assays was 100%. CONCLUSIONS: The LMTIA assay had high sensitivity, good detection, and simple operation. Thus, it is suitable for facilitating preliminary and cost-effective surveillance for the prevention and control of ASFV. The Korean Society of Veterinary Science 2022-05-02 /pmc/articles/PMC9346532/ /pubmed/35698807 http://dx.doi.org/10.4142/jvs.22001 Text en © 2022 The Korean Society of Veterinary Science https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Wang, Yongzhen
Wang, Borui
Xu, Dandan
Zhang, Meng
Zhang, Xiaohua
Wang, Deguo
Development of a ladder-shape melting temperature isothermal amplification (LMTIA) assay for detection of African swine fever virus (ASFV)
title Development of a ladder-shape melting temperature isothermal amplification (LMTIA) assay for detection of African swine fever virus (ASFV)
title_full Development of a ladder-shape melting temperature isothermal amplification (LMTIA) assay for detection of African swine fever virus (ASFV)
title_fullStr Development of a ladder-shape melting temperature isothermal amplification (LMTIA) assay for detection of African swine fever virus (ASFV)
title_full_unstemmed Development of a ladder-shape melting temperature isothermal amplification (LMTIA) assay for detection of African swine fever virus (ASFV)
title_short Development of a ladder-shape melting temperature isothermal amplification (LMTIA) assay for detection of African swine fever virus (ASFV)
title_sort development of a ladder-shape melting temperature isothermal amplification (lmtia) assay for detection of african swine fever virus (asfv)
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346532/
https://www.ncbi.nlm.nih.gov/pubmed/35698807
http://dx.doi.org/10.4142/jvs.22001
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