Cargando…

Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems

Biogeographical studies have traditionally focused on readily visible organisms, but recent technological advances are enabling analyses of the large-scale distribution of microscopic organisms, whose biogeographical patterns have long been debated. Here we assessed the global structure of plankton...

Descripción completa

Detalles Bibliográficos
Autores principales: Richter, Daniel J, Watteaux, Romain, Vannier, Thomas, Leconte, Jade, Frémont, Paul, Reygondeau, Gabriel, Maillet, Nicolas, Henry, Nicolas, Benoit, Gaëtan, Da Silva, Ophélie, Delmont, Tom O, Fernàndez-Guerra, Antonio, Suweis, Samir, Narci, Romain, Berney, Cédric, Eveillard, Damien, Gavory, Frederick, Guidi, Lionel, Labadie, Karine, Mahieu, Eric, Poulain, Julie, Romac, Sarah, Roux, Simon, Dimier, Céline, Kandels, Stefanie, Picheral, Marc, Searson, Sarah, Pesant, Stéphane, Aury, Jean-Marc, Brum, Jennifer R, Lemaitre, Claire, Pelletier, Eric, Bork, Peer, Sunagawa, Shinichi, Lombard, Fabien, Karp-Boss, Lee, Bowler, Chris, Sullivan, Matthew B, Karsenti, Eric, Mariadassou, Mahendra, Probert, Ian, Peterlongo, Pierre, Wincker, Patrick, de Vargas, Colomban, Ribera d'Alcalà, Maurizio, Iudicone, Daniele, Jaillon, Olivier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9348854/
https://www.ncbi.nlm.nih.gov/pubmed/35920817
http://dx.doi.org/10.7554/eLife.78129
_version_ 1784762003610402816
author Richter, Daniel J
Watteaux, Romain
Vannier, Thomas
Leconte, Jade
Frémont, Paul
Reygondeau, Gabriel
Maillet, Nicolas
Henry, Nicolas
Benoit, Gaëtan
Da Silva, Ophélie
Delmont, Tom O
Fernàndez-Guerra, Antonio
Suweis, Samir
Narci, Romain
Berney, Cédric
Eveillard, Damien
Gavory, Frederick
Guidi, Lionel
Labadie, Karine
Mahieu, Eric
Poulain, Julie
Romac, Sarah
Roux, Simon
Dimier, Céline
Kandels, Stefanie
Picheral, Marc
Searson, Sarah
Pesant, Stéphane
Aury, Jean-Marc
Brum, Jennifer R
Lemaitre, Claire
Pelletier, Eric
Bork, Peer
Sunagawa, Shinichi
Lombard, Fabien
Karp-Boss, Lee
Bowler, Chris
Sullivan, Matthew B
Karsenti, Eric
Mariadassou, Mahendra
Probert, Ian
Peterlongo, Pierre
Wincker, Patrick
de Vargas, Colomban
Ribera d'Alcalà, Maurizio
Iudicone, Daniele
Jaillon, Olivier
author_facet Richter, Daniel J
Watteaux, Romain
Vannier, Thomas
Leconte, Jade
Frémont, Paul
Reygondeau, Gabriel
Maillet, Nicolas
Henry, Nicolas
Benoit, Gaëtan
Da Silva, Ophélie
Delmont, Tom O
Fernàndez-Guerra, Antonio
Suweis, Samir
Narci, Romain
Berney, Cédric
Eveillard, Damien
Gavory, Frederick
Guidi, Lionel
Labadie, Karine
Mahieu, Eric
Poulain, Julie
Romac, Sarah
Roux, Simon
Dimier, Céline
Kandels, Stefanie
Picheral, Marc
Searson, Sarah
Pesant, Stéphane
Aury, Jean-Marc
Brum, Jennifer R
Lemaitre, Claire
Pelletier, Eric
Bork, Peer
Sunagawa, Shinichi
Lombard, Fabien
Karp-Boss, Lee
Bowler, Chris
Sullivan, Matthew B
Karsenti, Eric
Mariadassou, Mahendra
Probert, Ian
Peterlongo, Pierre
Wincker, Patrick
de Vargas, Colomban
Ribera d'Alcalà, Maurizio
Iudicone, Daniele
Jaillon, Olivier
author_sort Richter, Daniel J
collection PubMed
description Biogeographical studies have traditionally focused on readily visible organisms, but recent technological advances are enabling analyses of the large-scale distribution of microscopic organisms, whose biogeographical patterns have long been debated. Here we assessed the global structure of plankton geography and its relation to the biological, chemical, and physical context of the ocean (the ‘seascape’) by analyzing metagenomes of plankton communities sampled across oceans during the Tara Oceans expedition, in light of environmental data and ocean current transport. Using a consistent approach across organismal sizes that provides unprecedented resolution to measure changes in genomic composition between communities, we report a pan-ocean, size-dependent plankton biogeography overlying regional heterogeneity. We found robust evidence for a basin-scale impact of transport by ocean currents on plankton biogeography, and on a characteristic timescale of community dynamics going beyond simple seasonality or life history transitions of plankton.
format Online
Article
Text
id pubmed-9348854
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher eLife Sciences Publications, Ltd
record_format MEDLINE/PubMed
spelling pubmed-93488542022-08-04 Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems Richter, Daniel J Watteaux, Romain Vannier, Thomas Leconte, Jade Frémont, Paul Reygondeau, Gabriel Maillet, Nicolas Henry, Nicolas Benoit, Gaëtan Da Silva, Ophélie Delmont, Tom O Fernàndez-Guerra, Antonio Suweis, Samir Narci, Romain Berney, Cédric Eveillard, Damien Gavory, Frederick Guidi, Lionel Labadie, Karine Mahieu, Eric Poulain, Julie Romac, Sarah Roux, Simon Dimier, Céline Kandels, Stefanie Picheral, Marc Searson, Sarah Pesant, Stéphane Aury, Jean-Marc Brum, Jennifer R Lemaitre, Claire Pelletier, Eric Bork, Peer Sunagawa, Shinichi Lombard, Fabien Karp-Boss, Lee Bowler, Chris Sullivan, Matthew B Karsenti, Eric Mariadassou, Mahendra Probert, Ian Peterlongo, Pierre Wincker, Patrick de Vargas, Colomban Ribera d'Alcalà, Maurizio Iudicone, Daniele Jaillon, Olivier eLife Ecology Biogeographical studies have traditionally focused on readily visible organisms, but recent technological advances are enabling analyses of the large-scale distribution of microscopic organisms, whose biogeographical patterns have long been debated. Here we assessed the global structure of plankton geography and its relation to the biological, chemical, and physical context of the ocean (the ‘seascape’) by analyzing metagenomes of plankton communities sampled across oceans during the Tara Oceans expedition, in light of environmental data and ocean current transport. Using a consistent approach across organismal sizes that provides unprecedented resolution to measure changes in genomic composition between communities, we report a pan-ocean, size-dependent plankton biogeography overlying regional heterogeneity. We found robust evidence for a basin-scale impact of transport by ocean currents on plankton biogeography, and on a characteristic timescale of community dynamics going beyond simple seasonality or life history transitions of plankton. eLife Sciences Publications, Ltd 2022-08-03 /pmc/articles/PMC9348854/ /pubmed/35920817 http://dx.doi.org/10.7554/eLife.78129 Text en © 2022, Richter, Watteaux, Vannier et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Ecology
Richter, Daniel J
Watteaux, Romain
Vannier, Thomas
Leconte, Jade
Frémont, Paul
Reygondeau, Gabriel
Maillet, Nicolas
Henry, Nicolas
Benoit, Gaëtan
Da Silva, Ophélie
Delmont, Tom O
Fernàndez-Guerra, Antonio
Suweis, Samir
Narci, Romain
Berney, Cédric
Eveillard, Damien
Gavory, Frederick
Guidi, Lionel
Labadie, Karine
Mahieu, Eric
Poulain, Julie
Romac, Sarah
Roux, Simon
Dimier, Céline
Kandels, Stefanie
Picheral, Marc
Searson, Sarah
Pesant, Stéphane
Aury, Jean-Marc
Brum, Jennifer R
Lemaitre, Claire
Pelletier, Eric
Bork, Peer
Sunagawa, Shinichi
Lombard, Fabien
Karp-Boss, Lee
Bowler, Chris
Sullivan, Matthew B
Karsenti, Eric
Mariadassou, Mahendra
Probert, Ian
Peterlongo, Pierre
Wincker, Patrick
de Vargas, Colomban
Ribera d'Alcalà, Maurizio
Iudicone, Daniele
Jaillon, Olivier
Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
title Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
title_full Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
title_fullStr Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
title_full_unstemmed Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
title_short Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
title_sort genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
topic Ecology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9348854/
https://www.ncbi.nlm.nih.gov/pubmed/35920817
http://dx.doi.org/10.7554/eLife.78129
work_keys_str_mv AT richterdanielj genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT watteauxromain genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT vannierthomas genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT lecontejade genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT fremontpaul genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT reygondeaugabriel genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT mailletnicolas genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT henrynicolas genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT benoitgaetan genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT dasilvaophelie genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT delmonttomo genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT fernandezguerraantonio genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT suweissamir genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT narciromain genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT berneycedric genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT eveillarddamien genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT gavoryfrederick genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT guidilionel genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT labadiekarine genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT mahieueric genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT poulainjulie genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT romacsarah genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT rouxsimon genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT dimierceline genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT kandelsstefanie genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT picheralmarc genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT searsonsarah genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT pesantstephane genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT auryjeanmarc genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT brumjenniferr genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT lemaitreclaire genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT pelletiereric genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT borkpeer genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT sunagawashinichi genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT lombardfabien genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT karpbosslee genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT bowlerchris genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT sullivanmatthewb genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT karsentieric genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT mariadassoumahendra genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT probertian genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT peterlongopierre genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT winckerpatrick genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT devargascolomban genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT riberadalcalamaurizio genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT iudiconedaniele genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems
AT jaillonolivier genomicevidenceforglobaloceanplanktonbiogeographyshapedbylargescalecurrentsystems