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Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
Biogeographical studies have traditionally focused on readily visible organisms, but recent technological advances are enabling analyses of the large-scale distribution of microscopic organisms, whose biogeographical patterns have long been debated. Here we assessed the global structure of plankton...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9348854/ https://www.ncbi.nlm.nih.gov/pubmed/35920817 http://dx.doi.org/10.7554/eLife.78129 |
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author | Richter, Daniel J Watteaux, Romain Vannier, Thomas Leconte, Jade Frémont, Paul Reygondeau, Gabriel Maillet, Nicolas Henry, Nicolas Benoit, Gaëtan Da Silva, Ophélie Delmont, Tom O Fernàndez-Guerra, Antonio Suweis, Samir Narci, Romain Berney, Cédric Eveillard, Damien Gavory, Frederick Guidi, Lionel Labadie, Karine Mahieu, Eric Poulain, Julie Romac, Sarah Roux, Simon Dimier, Céline Kandels, Stefanie Picheral, Marc Searson, Sarah Pesant, Stéphane Aury, Jean-Marc Brum, Jennifer R Lemaitre, Claire Pelletier, Eric Bork, Peer Sunagawa, Shinichi Lombard, Fabien Karp-Boss, Lee Bowler, Chris Sullivan, Matthew B Karsenti, Eric Mariadassou, Mahendra Probert, Ian Peterlongo, Pierre Wincker, Patrick de Vargas, Colomban Ribera d'Alcalà, Maurizio Iudicone, Daniele Jaillon, Olivier |
author_facet | Richter, Daniel J Watteaux, Romain Vannier, Thomas Leconte, Jade Frémont, Paul Reygondeau, Gabriel Maillet, Nicolas Henry, Nicolas Benoit, Gaëtan Da Silva, Ophélie Delmont, Tom O Fernàndez-Guerra, Antonio Suweis, Samir Narci, Romain Berney, Cédric Eveillard, Damien Gavory, Frederick Guidi, Lionel Labadie, Karine Mahieu, Eric Poulain, Julie Romac, Sarah Roux, Simon Dimier, Céline Kandels, Stefanie Picheral, Marc Searson, Sarah Pesant, Stéphane Aury, Jean-Marc Brum, Jennifer R Lemaitre, Claire Pelletier, Eric Bork, Peer Sunagawa, Shinichi Lombard, Fabien Karp-Boss, Lee Bowler, Chris Sullivan, Matthew B Karsenti, Eric Mariadassou, Mahendra Probert, Ian Peterlongo, Pierre Wincker, Patrick de Vargas, Colomban Ribera d'Alcalà, Maurizio Iudicone, Daniele Jaillon, Olivier |
author_sort | Richter, Daniel J |
collection | PubMed |
description | Biogeographical studies have traditionally focused on readily visible organisms, but recent technological advances are enabling analyses of the large-scale distribution of microscopic organisms, whose biogeographical patterns have long been debated. Here we assessed the global structure of plankton geography and its relation to the biological, chemical, and physical context of the ocean (the ‘seascape’) by analyzing metagenomes of plankton communities sampled across oceans during the Tara Oceans expedition, in light of environmental data and ocean current transport. Using a consistent approach across organismal sizes that provides unprecedented resolution to measure changes in genomic composition between communities, we report a pan-ocean, size-dependent plankton biogeography overlying regional heterogeneity. We found robust evidence for a basin-scale impact of transport by ocean currents on plankton biogeography, and on a characteristic timescale of community dynamics going beyond simple seasonality or life history transitions of plankton. |
format | Online Article Text |
id | pubmed-9348854 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-93488542022-08-04 Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems Richter, Daniel J Watteaux, Romain Vannier, Thomas Leconte, Jade Frémont, Paul Reygondeau, Gabriel Maillet, Nicolas Henry, Nicolas Benoit, Gaëtan Da Silva, Ophélie Delmont, Tom O Fernàndez-Guerra, Antonio Suweis, Samir Narci, Romain Berney, Cédric Eveillard, Damien Gavory, Frederick Guidi, Lionel Labadie, Karine Mahieu, Eric Poulain, Julie Romac, Sarah Roux, Simon Dimier, Céline Kandels, Stefanie Picheral, Marc Searson, Sarah Pesant, Stéphane Aury, Jean-Marc Brum, Jennifer R Lemaitre, Claire Pelletier, Eric Bork, Peer Sunagawa, Shinichi Lombard, Fabien Karp-Boss, Lee Bowler, Chris Sullivan, Matthew B Karsenti, Eric Mariadassou, Mahendra Probert, Ian Peterlongo, Pierre Wincker, Patrick de Vargas, Colomban Ribera d'Alcalà, Maurizio Iudicone, Daniele Jaillon, Olivier eLife Ecology Biogeographical studies have traditionally focused on readily visible organisms, but recent technological advances are enabling analyses of the large-scale distribution of microscopic organisms, whose biogeographical patterns have long been debated. Here we assessed the global structure of plankton geography and its relation to the biological, chemical, and physical context of the ocean (the ‘seascape’) by analyzing metagenomes of plankton communities sampled across oceans during the Tara Oceans expedition, in light of environmental data and ocean current transport. Using a consistent approach across organismal sizes that provides unprecedented resolution to measure changes in genomic composition between communities, we report a pan-ocean, size-dependent plankton biogeography overlying regional heterogeneity. We found robust evidence for a basin-scale impact of transport by ocean currents on plankton biogeography, and on a characteristic timescale of community dynamics going beyond simple seasonality or life history transitions of plankton. eLife Sciences Publications, Ltd 2022-08-03 /pmc/articles/PMC9348854/ /pubmed/35920817 http://dx.doi.org/10.7554/eLife.78129 Text en © 2022, Richter, Watteaux, Vannier et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Ecology Richter, Daniel J Watteaux, Romain Vannier, Thomas Leconte, Jade Frémont, Paul Reygondeau, Gabriel Maillet, Nicolas Henry, Nicolas Benoit, Gaëtan Da Silva, Ophélie Delmont, Tom O Fernàndez-Guerra, Antonio Suweis, Samir Narci, Romain Berney, Cédric Eveillard, Damien Gavory, Frederick Guidi, Lionel Labadie, Karine Mahieu, Eric Poulain, Julie Romac, Sarah Roux, Simon Dimier, Céline Kandels, Stefanie Picheral, Marc Searson, Sarah Pesant, Stéphane Aury, Jean-Marc Brum, Jennifer R Lemaitre, Claire Pelletier, Eric Bork, Peer Sunagawa, Shinichi Lombard, Fabien Karp-Boss, Lee Bowler, Chris Sullivan, Matthew B Karsenti, Eric Mariadassou, Mahendra Probert, Ian Peterlongo, Pierre Wincker, Patrick de Vargas, Colomban Ribera d'Alcalà, Maurizio Iudicone, Daniele Jaillon, Olivier Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems |
title | Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems |
title_full | Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems |
title_fullStr | Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems |
title_full_unstemmed | Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems |
title_short | Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems |
title_sort | genomic evidence for global ocean plankton biogeography shaped by large-scale current systems |
topic | Ecology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9348854/ https://www.ncbi.nlm.nih.gov/pubmed/35920817 http://dx.doi.org/10.7554/eLife.78129 |
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