Gwaihir: Jupyter Notebook graphical user interface for Bragg coherent diffraction imaging

Bragg coherent X-ray diffraction is a nondestructive method for probing material structure in three dimensions at the nanoscale, with unprecedented resolution in displacement and strain fields. This work presents Gwaihir, a user-friendly and open-source tool to process and analyze Bragg coherent X-r...

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Detalles Bibliográficos
Autores principales: Simonne, David, Carnis, Jérôme, Atlan, Clément, Chatelier, Corentin, Favre-Nicolin, Vincent, Dupraz, Maxime, Leake, Steven J., Zatterin, Edoardo, Resta, Andrea, Coati, Alessandro, Richard, Marie-Ingrid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2022
Materias:
Computer Programs
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9348885/
https://www.ncbi.nlm.nih.gov/pubmed/35974722
http://dx.doi.org/10.1107/S1600576722005854
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author Simonne, David
Carnis, Jérôme
Atlan, Clément
Chatelier, Corentin
Favre-Nicolin, Vincent
Dupraz, Maxime
Leake, Steven J.
Zatterin, Edoardo
Resta, Andrea
Coati, Alessandro
Richard, Marie-Ingrid
author_facet Simonne, David
Carnis, Jérôme
Atlan, Clément
Chatelier, Corentin
Favre-Nicolin, Vincent
Dupraz, Maxime
Leake, Steven J.
Zatterin, Edoardo
Resta, Andrea
Coati, Alessandro
Richard, Marie-Ingrid
author_sort Simonne, David
collection PubMed
description Bragg coherent X-ray diffraction is a nondestructive method for probing material structure in three dimensions at the nanoscale, with unprecedented resolution in displacement and strain fields. This work presents Gwaihir, a user-friendly and open-source tool to process and analyze Bragg coherent X-ray diffraction data. It integrates the functionalities of the existing packages bcdi and PyNX in the same toolbox, creating a natural workflow and promoting data reproducibility. Its graphical interface, based on Jupyter Notebook widgets, combines an interactive approach for data analysis with a powerful environment designed to link large-scale facilities and scientists.
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spelling pubmed-93488852022-08-15 Gwaihir: Jupyter Notebook graphical user interface for Bragg coherent diffraction imaging Simonne, David Carnis, Jérôme Atlan, Clément Chatelier, Corentin Favre-Nicolin, Vincent Dupraz, Maxime Leake, Steven J. Zatterin, Edoardo Resta, Andrea Coati, Alessandro Richard, Marie-Ingrid J Appl Crystallogr Computer Programs Bragg coherent X-ray diffraction is a nondestructive method for probing material structure in three dimensions at the nanoscale, with unprecedented resolution in displacement and strain fields. This work presents Gwaihir, a user-friendly and open-source tool to process and analyze Bragg coherent X-ray diffraction data. It integrates the functionalities of the existing packages bcdi and PyNX in the same toolbox, creating a natural workflow and promoting data reproducibility. Its graphical interface, based on Jupyter Notebook widgets, combines an interactive approach for data analysis with a powerful environment designed to link large-scale facilities and scientists. International Union of Crystallography 2022-07-15 /pmc/articles/PMC9348885/ /pubmed/35974722 http://dx.doi.org/10.1107/S1600576722005854 Text en © David Simonne et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Computer Programs
Simonne, David
Carnis, Jérôme
Atlan, Clément
Chatelier, Corentin
Favre-Nicolin, Vincent
Dupraz, Maxime
Leake, Steven J.
Zatterin, Edoardo
Resta, Andrea
Coati, Alessandro
Richard, Marie-Ingrid
Gwaihir: Jupyter Notebook graphical user interface for Bragg coherent diffraction imaging
title Gwaihir: Jupyter Notebook graphical user interface for Bragg coherent diffraction imaging
title_full Gwaihir: Jupyter Notebook graphical user interface for Bragg coherent diffraction imaging
title_fullStr Gwaihir: Jupyter Notebook graphical user interface for Bragg coherent diffraction imaging
title_full_unstemmed Gwaihir: Jupyter Notebook graphical user interface for Bragg coherent diffraction imaging
title_short Gwaihir: Jupyter Notebook graphical user interface for Bragg coherent diffraction imaging
title_sort gwaihir: jupyter notebook graphical user interface for bragg coherent diffraction imaging
topic Computer Programs
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9348885/
https://www.ncbi.nlm.nih.gov/pubmed/35974722
http://dx.doi.org/10.1107/S1600576722005854
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