Cargando…

ReviewR: a light-weight and extensible tool for manual review of clinical records

OBJECTIVES: Manual record review is a crucial step for electronic health record (EHR)-based research, but it has poor workflows and is error prone. We sought to build a tool that provides a unified environment for data review and chart abstraction data entry. MATERIALS AND METHODS: ReviewR is an ope...

Descripción completa

Detalles Bibliográficos
Autores principales: Mayer, David A, Rasmussen, Luke V, Roark, Christopher D, Kahn, Michael G, Schilling, Lisa M, Wiley, Laura K
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9350014/
https://www.ncbi.nlm.nih.gov/pubmed/35936991
http://dx.doi.org/10.1093/jamiaopen/ooac071
_version_ 1784762171867004928
author Mayer, David A
Rasmussen, Luke V
Roark, Christopher D
Kahn, Michael G
Schilling, Lisa M
Wiley, Laura K
author_facet Mayer, David A
Rasmussen, Luke V
Roark, Christopher D
Kahn, Michael G
Schilling, Lisa M
Wiley, Laura K
author_sort Mayer, David A
collection PubMed
description OBJECTIVES: Manual record review is a crucial step for electronic health record (EHR)-based research, but it has poor workflows and is error prone. We sought to build a tool that provides a unified environment for data review and chart abstraction data entry. MATERIALS AND METHODS: ReviewR is an open-source R Shiny application that can be deployed on a single machine or made available to multiple users. It supports multiple data models and database systems, and integrates with the REDCap API for storing abstraction results. RESULTS: We describe 2 real-world uses and extensions of ReviewR. Since its release in April 2021 as a package on CRAN it has been downloaded 2204 times. DISCUSSION AND CONCLUSION: ReviewR provides an easily accessible review interface for clinical data warehouses. Its modular, extensible, and open source nature afford future expansion by other researchers.
format Online
Article
Text
id pubmed-9350014
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-93500142022-08-05 ReviewR: a light-weight and extensible tool for manual review of clinical records Mayer, David A Rasmussen, Luke V Roark, Christopher D Kahn, Michael G Schilling, Lisa M Wiley, Laura K JAMIA Open Application Notes OBJECTIVES: Manual record review is a crucial step for electronic health record (EHR)-based research, but it has poor workflows and is error prone. We sought to build a tool that provides a unified environment for data review and chart abstraction data entry. MATERIALS AND METHODS: ReviewR is an open-source R Shiny application that can be deployed on a single machine or made available to multiple users. It supports multiple data models and database systems, and integrates with the REDCap API for storing abstraction results. RESULTS: We describe 2 real-world uses and extensions of ReviewR. Since its release in April 2021 as a package on CRAN it has been downloaded 2204 times. DISCUSSION AND CONCLUSION: ReviewR provides an easily accessible review interface for clinical data warehouses. Its modular, extensible, and open source nature afford future expansion by other researchers. Oxford University Press 2022-08-03 /pmc/articles/PMC9350014/ /pubmed/35936991 http://dx.doi.org/10.1093/jamiaopen/ooac071 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Application Notes
Mayer, David A
Rasmussen, Luke V
Roark, Christopher D
Kahn, Michael G
Schilling, Lisa M
Wiley, Laura K
ReviewR: a light-weight and extensible tool for manual review of clinical records
title ReviewR: a light-weight and extensible tool for manual review of clinical records
title_full ReviewR: a light-weight and extensible tool for manual review of clinical records
title_fullStr ReviewR: a light-weight and extensible tool for manual review of clinical records
title_full_unstemmed ReviewR: a light-weight and extensible tool for manual review of clinical records
title_short ReviewR: a light-weight and extensible tool for manual review of clinical records
title_sort reviewr: a light-weight and extensible tool for manual review of clinical records
topic Application Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9350014/
https://www.ncbi.nlm.nih.gov/pubmed/35936991
http://dx.doi.org/10.1093/jamiaopen/ooac071
work_keys_str_mv AT mayerdavida reviewralightweightandextensibletoolformanualreviewofclinicalrecords
AT rasmussenlukev reviewralightweightandextensibletoolformanualreviewofclinicalrecords
AT roarkchristopherd reviewralightweightandextensibletoolformanualreviewofclinicalrecords
AT kahnmichaelg reviewralightweightandextensibletoolformanualreviewofclinicalrecords
AT schillinglisam reviewralightweightandextensibletoolformanualreviewofclinicalrecords
AT wileylaurak reviewralightweightandextensibletoolformanualreviewofclinicalrecords