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REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease
Diabetic kidney disease (DKD) is the leading cause of end-stage renal disease. Clinical features are traditionally used to predict DKD, yet with low diagnostic efficacy. Most of the recent biomarkers used to predict DKD are based on transcriptomics and metabolomics; however, they also should be used...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9352862/ https://www.ncbi.nlm.nih.gov/pubmed/35937821 http://dx.doi.org/10.3389/fendo.2022.935796 |
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author | Wang, Xinyu Wu, Han Yang, Guangyan Xiang, Jiaqing Xiong, Lijiao Zhao, Li Liao, Tingfeng Zhao, Xinyue Kang, Lin Yang, Shu Liang, Zhen |
author_facet | Wang, Xinyu Wu, Han Yang, Guangyan Xiang, Jiaqing Xiong, Lijiao Zhao, Li Liao, Tingfeng Zhao, Xinyue Kang, Lin Yang, Shu Liang, Zhen |
author_sort | Wang, Xinyu |
collection | PubMed |
description | Diabetic kidney disease (DKD) is the leading cause of end-stage renal disease. Clinical features are traditionally used to predict DKD, yet with low diagnostic efficacy. Most of the recent biomarkers used to predict DKD are based on transcriptomics and metabolomics; however, they also should be used in combination with many other predictive indicators. The purpose of this study was thus to identify a simplified class of blood biomarkers capable of predicting the risk of developing DKD. The Gene Expression Omnibus database was screened for DKD biomarkers, and differentially expressed genes (DEGs) in human blood and kidney were identified via gene expression analysis and the Least Absolute Shrinkage and Selection Operator regression. A comparison of the area under the curve (AUC) profiles on multiple receiver operating characteristic curves of the DEGs in DKD and other renal diseases revealed that REG1A and RUNX3 had the highest specificity for DKD diagnosis. The AUCs of the combined expression of REG1A and RUNX3 in kidney (AUC = 0.929) and blood samples (AUC = 0.917) of DKD patients were similar to each other. The AUC of blood samples from DKD patients and healthy individuals obtained for external validation further demonstrated that REG1A combined with RUNX3 had significant diagnostic efficacy (AUC=0.948). REG1A and RUNX3 expression levels were found to be positively and negatively correlated with urinary albumin creatinine ratio and estimated glomerular filtration rate, respectively. Kaplan-Meier curves also revealed the potential of REG1A and RUNX3 for predicting the risk of DKD. In conclusion, REG1A and RUNX3 may serve as biomarkers for predicting the risk of developing DKD. |
format | Online Article Text |
id | pubmed-9352862 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93528622022-08-06 REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease Wang, Xinyu Wu, Han Yang, Guangyan Xiang, Jiaqing Xiong, Lijiao Zhao, Li Liao, Tingfeng Zhao, Xinyue Kang, Lin Yang, Shu Liang, Zhen Front Endocrinol (Lausanne) Endocrinology Diabetic kidney disease (DKD) is the leading cause of end-stage renal disease. Clinical features are traditionally used to predict DKD, yet with low diagnostic efficacy. Most of the recent biomarkers used to predict DKD are based on transcriptomics and metabolomics; however, they also should be used in combination with many other predictive indicators. The purpose of this study was thus to identify a simplified class of blood biomarkers capable of predicting the risk of developing DKD. The Gene Expression Omnibus database was screened for DKD biomarkers, and differentially expressed genes (DEGs) in human blood and kidney were identified via gene expression analysis and the Least Absolute Shrinkage and Selection Operator regression. A comparison of the area under the curve (AUC) profiles on multiple receiver operating characteristic curves of the DEGs in DKD and other renal diseases revealed that REG1A and RUNX3 had the highest specificity for DKD diagnosis. The AUCs of the combined expression of REG1A and RUNX3 in kidney (AUC = 0.929) and blood samples (AUC = 0.917) of DKD patients were similar to each other. The AUC of blood samples from DKD patients and healthy individuals obtained for external validation further demonstrated that REG1A combined with RUNX3 had significant diagnostic efficacy (AUC=0.948). REG1A and RUNX3 expression levels were found to be positively and negatively correlated with urinary albumin creatinine ratio and estimated glomerular filtration rate, respectively. Kaplan-Meier curves also revealed the potential of REG1A and RUNX3 for predicting the risk of DKD. In conclusion, REG1A and RUNX3 may serve as biomarkers for predicting the risk of developing DKD. Frontiers Media S.A. 2022-07-22 /pmc/articles/PMC9352862/ /pubmed/35937821 http://dx.doi.org/10.3389/fendo.2022.935796 Text en Copyright © 2022 Wang, Wu, Yang, Xiang, Xiong, Zhao, Liao, Zhao, Kang, Yang and Liang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Endocrinology Wang, Xinyu Wu, Han Yang, Guangyan Xiang, Jiaqing Xiong, Lijiao Zhao, Li Liao, Tingfeng Zhao, Xinyue Kang, Lin Yang, Shu Liang, Zhen REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease |
title | REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease |
title_full | REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease |
title_fullStr | REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease |
title_full_unstemmed | REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease |
title_short | REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease |
title_sort | reg1a and runx3 are potential biomarkers for predicting the risk of diabetic kidney disease |
topic | Endocrinology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9352862/ https://www.ncbi.nlm.nih.gov/pubmed/35937821 http://dx.doi.org/10.3389/fendo.2022.935796 |
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