Cargando…

REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease

Diabetic kidney disease (DKD) is the leading cause of end-stage renal disease. Clinical features are traditionally used to predict DKD, yet with low diagnostic efficacy. Most of the recent biomarkers used to predict DKD are based on transcriptomics and metabolomics; however, they also should be used...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Xinyu, Wu, Han, Yang, Guangyan, Xiang, Jiaqing, Xiong, Lijiao, Zhao, Li, Liao, Tingfeng, Zhao, Xinyue, Kang, Lin, Yang, Shu, Liang, Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9352862/
https://www.ncbi.nlm.nih.gov/pubmed/35937821
http://dx.doi.org/10.3389/fendo.2022.935796
_version_ 1784762741211267072
author Wang, Xinyu
Wu, Han
Yang, Guangyan
Xiang, Jiaqing
Xiong, Lijiao
Zhao, Li
Liao, Tingfeng
Zhao, Xinyue
Kang, Lin
Yang, Shu
Liang, Zhen
author_facet Wang, Xinyu
Wu, Han
Yang, Guangyan
Xiang, Jiaqing
Xiong, Lijiao
Zhao, Li
Liao, Tingfeng
Zhao, Xinyue
Kang, Lin
Yang, Shu
Liang, Zhen
author_sort Wang, Xinyu
collection PubMed
description Diabetic kidney disease (DKD) is the leading cause of end-stage renal disease. Clinical features are traditionally used to predict DKD, yet with low diagnostic efficacy. Most of the recent biomarkers used to predict DKD are based on transcriptomics and metabolomics; however, they also should be used in combination with many other predictive indicators. The purpose of this study was thus to identify a simplified class of blood biomarkers capable of predicting the risk of developing DKD. The Gene Expression Omnibus database was screened for DKD biomarkers, and differentially expressed genes (DEGs) in human blood and kidney were identified via gene expression analysis and the Least Absolute Shrinkage and Selection Operator regression. A comparison of the area under the curve (AUC) profiles on multiple receiver operating characteristic curves of the DEGs in DKD and other renal diseases revealed that REG1A and RUNX3 had the highest specificity for DKD diagnosis. The AUCs of the combined expression of REG1A and RUNX3 in kidney (AUC = 0.929) and blood samples (AUC = 0.917) of DKD patients were similar to each other. The AUC of blood samples from DKD patients and healthy individuals obtained for external validation further demonstrated that REG1A combined with RUNX3 had significant diagnostic efficacy (AUC=0.948). REG1A and RUNX3 expression levels were found to be positively and negatively correlated with urinary albumin creatinine ratio and estimated glomerular filtration rate, respectively. Kaplan-Meier curves also revealed the potential of REG1A and RUNX3 for predicting the risk of DKD. In conclusion, REG1A and RUNX3 may serve as biomarkers for predicting the risk of developing DKD.
format Online
Article
Text
id pubmed-9352862
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-93528622022-08-06 REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease Wang, Xinyu Wu, Han Yang, Guangyan Xiang, Jiaqing Xiong, Lijiao Zhao, Li Liao, Tingfeng Zhao, Xinyue Kang, Lin Yang, Shu Liang, Zhen Front Endocrinol (Lausanne) Endocrinology Diabetic kidney disease (DKD) is the leading cause of end-stage renal disease. Clinical features are traditionally used to predict DKD, yet with low diagnostic efficacy. Most of the recent biomarkers used to predict DKD are based on transcriptomics and metabolomics; however, they also should be used in combination with many other predictive indicators. The purpose of this study was thus to identify a simplified class of blood biomarkers capable of predicting the risk of developing DKD. The Gene Expression Omnibus database was screened for DKD biomarkers, and differentially expressed genes (DEGs) in human blood and kidney were identified via gene expression analysis and the Least Absolute Shrinkage and Selection Operator regression. A comparison of the area under the curve (AUC) profiles on multiple receiver operating characteristic curves of the DEGs in DKD and other renal diseases revealed that REG1A and RUNX3 had the highest specificity for DKD diagnosis. The AUCs of the combined expression of REG1A and RUNX3 in kidney (AUC = 0.929) and blood samples (AUC = 0.917) of DKD patients were similar to each other. The AUC of blood samples from DKD patients and healthy individuals obtained for external validation further demonstrated that REG1A combined with RUNX3 had significant diagnostic efficacy (AUC=0.948). REG1A and RUNX3 expression levels were found to be positively and negatively correlated with urinary albumin creatinine ratio and estimated glomerular filtration rate, respectively. Kaplan-Meier curves also revealed the potential of REG1A and RUNX3 for predicting the risk of DKD. In conclusion, REG1A and RUNX3 may serve as biomarkers for predicting the risk of developing DKD. Frontiers Media S.A. 2022-07-22 /pmc/articles/PMC9352862/ /pubmed/35937821 http://dx.doi.org/10.3389/fendo.2022.935796 Text en Copyright © 2022 Wang, Wu, Yang, Xiang, Xiong, Zhao, Liao, Zhao, Kang, Yang and Liang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Endocrinology
Wang, Xinyu
Wu, Han
Yang, Guangyan
Xiang, Jiaqing
Xiong, Lijiao
Zhao, Li
Liao, Tingfeng
Zhao, Xinyue
Kang, Lin
Yang, Shu
Liang, Zhen
REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease
title REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease
title_full REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease
title_fullStr REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease
title_full_unstemmed REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease
title_short REG1A and RUNX3 Are Potential Biomarkers for Predicting the Risk of Diabetic Kidney Disease
title_sort reg1a and runx3 are potential biomarkers for predicting the risk of diabetic kidney disease
topic Endocrinology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9352862/
https://www.ncbi.nlm.nih.gov/pubmed/35937821
http://dx.doi.org/10.3389/fendo.2022.935796
work_keys_str_mv AT wangxinyu reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT wuhan reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT yangguangyan reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT xiangjiaqing reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT xionglijiao reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT zhaoli reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT liaotingfeng reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT zhaoxinyue reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT kanglin reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT yangshu reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease
AT liangzhen reg1aandrunx3arepotentialbiomarkersforpredictingtheriskofdiabetickidneydisease