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Identification and validation of an immune-related gene prognostic signature for clear cell renal carcinoma

Clear Cell Renal Carcinoma (ccRCC) accounts for nearly 80% of renal carcinoma cases, and immunotherapy plays an important role in ccRCC therapy. However, the responses to immunotherapy and overall survival for ccRCC patients are still hard to predict. Here, we constructed an immune-related predictiv...

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Autores principales: Hua, Shan, Xie, Zhiwen, Zhang, Yongqing, Wu, Lei, Shi, Fei, Wang, Xingjie, Xia, Shujie, Dong, Shengli, Jiang, Juntao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9352939/
https://www.ncbi.nlm.nih.gov/pubmed/35936012
http://dx.doi.org/10.3389/fimmu.2022.869297
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author Hua, Shan
Xie, Zhiwen
Zhang, Yongqing
Wu, Lei
Shi, Fei
Wang, Xingjie
Xia, Shujie
Dong, Shengli
Jiang, Juntao
author_facet Hua, Shan
Xie, Zhiwen
Zhang, Yongqing
Wu, Lei
Shi, Fei
Wang, Xingjie
Xia, Shujie
Dong, Shengli
Jiang, Juntao
author_sort Hua, Shan
collection PubMed
description Clear Cell Renal Carcinoma (ccRCC) accounts for nearly 80% of renal carcinoma cases, and immunotherapy plays an important role in ccRCC therapy. However, the responses to immunotherapy and overall survival for ccRCC patients are still hard to predict. Here, we constructed an immune-related predictive signature using 19 genes based on TCGA datasets. We also analyzed its relationships between disease prognosis, infiltrating immune cells, immune subtypes, mutation load, immune dysfunction, immune escape, etc. We found that our signature can distinguish immune characteristics and predict immunotherapeutic response for ccRCC patients with better prognostic prediction value than other immune scores. The expression levels of prognostic genes were determined by RT-qPCR assay. This signature may help to predict overall survival and guide the treatment for patients with ccRCC.
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spelling pubmed-93529392022-08-06 Identification and validation of an immune-related gene prognostic signature for clear cell renal carcinoma Hua, Shan Xie, Zhiwen Zhang, Yongqing Wu, Lei Shi, Fei Wang, Xingjie Xia, Shujie Dong, Shengli Jiang, Juntao Front Immunol Immunology Clear Cell Renal Carcinoma (ccRCC) accounts for nearly 80% of renal carcinoma cases, and immunotherapy plays an important role in ccRCC therapy. However, the responses to immunotherapy and overall survival for ccRCC patients are still hard to predict. Here, we constructed an immune-related predictive signature using 19 genes based on TCGA datasets. We also analyzed its relationships between disease prognosis, infiltrating immune cells, immune subtypes, mutation load, immune dysfunction, immune escape, etc. We found that our signature can distinguish immune characteristics and predict immunotherapeutic response for ccRCC patients with better prognostic prediction value than other immune scores. The expression levels of prognostic genes were determined by RT-qPCR assay. This signature may help to predict overall survival and guide the treatment for patients with ccRCC. Frontiers Media S.A. 2022-07-22 /pmc/articles/PMC9352939/ /pubmed/35936012 http://dx.doi.org/10.3389/fimmu.2022.869297 Text en Copyright © 2022 Hua, Xie, Zhang, Wu, Shi, Wang, Xia, Dong and Jiang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Hua, Shan
Xie, Zhiwen
Zhang, Yongqing
Wu, Lei
Shi, Fei
Wang, Xingjie
Xia, Shujie
Dong, Shengli
Jiang, Juntao
Identification and validation of an immune-related gene prognostic signature for clear cell renal carcinoma
title Identification and validation of an immune-related gene prognostic signature for clear cell renal carcinoma
title_full Identification and validation of an immune-related gene prognostic signature for clear cell renal carcinoma
title_fullStr Identification and validation of an immune-related gene prognostic signature for clear cell renal carcinoma
title_full_unstemmed Identification and validation of an immune-related gene prognostic signature for clear cell renal carcinoma
title_short Identification and validation of an immune-related gene prognostic signature for clear cell renal carcinoma
title_sort identification and validation of an immune-related gene prognostic signature for clear cell renal carcinoma
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9352939/
https://www.ncbi.nlm.nih.gov/pubmed/35936012
http://dx.doi.org/10.3389/fimmu.2022.869297
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