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Molecular mechanisms of Biyu decoction as treatment for psoriasis: A network pharmacology and molecular docking study

BACKGROUND: The therapeutic effects of a combination of Chinese medicines called Biyu decoction have been clinically verified, although its molecular targets in psoriasis remain unknown. AIM: To explore the molecular mechanisms of Biyu decoction for psoriasis treatment. METHODS: In this network phar...

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Autores principales: Wang, Zi, Zhang, Hao-Min, Guo, Yuan-Rui, Li, Ling-Ling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Baishideng Publishing Group Inc 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9353920/
https://www.ncbi.nlm.nih.gov/pubmed/36158000
http://dx.doi.org/10.12998/wjcc.v10.i21.7224
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author Wang, Zi
Zhang, Hao-Min
Guo, Yuan-Rui
Li, Ling-Ling
author_facet Wang, Zi
Zhang, Hao-Min
Guo, Yuan-Rui
Li, Ling-Ling
author_sort Wang, Zi
collection PubMed
description BACKGROUND: The therapeutic effects of a combination of Chinese medicines called Biyu decoction have been clinically verified, although its molecular targets in psoriasis remain unknown. AIM: To explore the molecular mechanisms of Biyu decoction for psoriasis treatment. METHODS: In this network pharmacology and molecular docking study, the Traditional Chinese Medicine Systems Pharmacology database was searched for Biyu decoction active ingredients. GeneCards, Online Mendelian Inheritance in Man, PharmGkb, Therapeutic Target Database, and DrugBank databases were searched for psoriasis-related genes. The genes targeted by the decoction’s active ingredient and disease genes were intersected to obtain predictive targets of the drug during psoriasis treatment. Cytoscape 3.8.0 was used to construct a drug component/ target disease network. The The functional protein association networks database and Cytoscape were used to construct a protein-protein interaction network and streamline the core network. The Gene Ontology and Kyoto Encyclopedia of Genes and Genomes were used for pathway enrichment analysis. Molecular docking technology was used to verify the drug component/target disease network. RESULTS: We screened 117 major active ingredients, including quercetin, kaempferol, naringenin, and acetyl-shikonin, and identified 213 gene targets, such as MAPK3, JUN, FOS, MYC, MAPK8, STAT3, and NFKBIA. Using a molecular docking analysis, the main active ingredients demonstrated good binding to the core targets. The Gene Ontology analysis showed that these ingredients were significantly associated with biological activities, such as transcription factor DNA binding, RNA polymerase II-specific DNA binding of transcription factors, and cytokine receptor binding; responses to lipopolysaccharides, molecules of bacterial origin, and oxidative stress; and were mainly distributed in membrane rafts, microdomains, and regions. The Kyoto Encyclopedia of Genes and Genomes analysis showed that decoction ingredients act on Th17 cell differentiation, tumor necrosis factor and mitogen-activated protein signaling pathways, the interleukin-17 signaling pathway, and the PI3K-Akt signaling pathway. CONCLUSION: Biyu decoction may be effective against psoriasis through multi-component, multi-target, and multi-channel synergy.
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spelling pubmed-93539202022-09-23 Molecular mechanisms of Biyu decoction as treatment for psoriasis: A network pharmacology and molecular docking study Wang, Zi Zhang, Hao-Min Guo, Yuan-Rui Li, Ling-Ling World J Clin Cases Clinical and Translational Research BACKGROUND: The therapeutic effects of a combination of Chinese medicines called Biyu decoction have been clinically verified, although its molecular targets in psoriasis remain unknown. AIM: To explore the molecular mechanisms of Biyu decoction for psoriasis treatment. METHODS: In this network pharmacology and molecular docking study, the Traditional Chinese Medicine Systems Pharmacology database was searched for Biyu decoction active ingredients. GeneCards, Online Mendelian Inheritance in Man, PharmGkb, Therapeutic Target Database, and DrugBank databases were searched for psoriasis-related genes. The genes targeted by the decoction’s active ingredient and disease genes were intersected to obtain predictive targets of the drug during psoriasis treatment. Cytoscape 3.8.0 was used to construct a drug component/ target disease network. The The functional protein association networks database and Cytoscape were used to construct a protein-protein interaction network and streamline the core network. The Gene Ontology and Kyoto Encyclopedia of Genes and Genomes were used for pathway enrichment analysis. Molecular docking technology was used to verify the drug component/target disease network. RESULTS: We screened 117 major active ingredients, including quercetin, kaempferol, naringenin, and acetyl-shikonin, and identified 213 gene targets, such as MAPK3, JUN, FOS, MYC, MAPK8, STAT3, and NFKBIA. Using a molecular docking analysis, the main active ingredients demonstrated good binding to the core targets. The Gene Ontology analysis showed that these ingredients were significantly associated with biological activities, such as transcription factor DNA binding, RNA polymerase II-specific DNA binding of transcription factors, and cytokine receptor binding; responses to lipopolysaccharides, molecules of bacterial origin, and oxidative stress; and were mainly distributed in membrane rafts, microdomains, and regions. The Kyoto Encyclopedia of Genes and Genomes analysis showed that decoction ingredients act on Th17 cell differentiation, tumor necrosis factor and mitogen-activated protein signaling pathways, the interleukin-17 signaling pathway, and the PI3K-Akt signaling pathway. CONCLUSION: Biyu decoction may be effective against psoriasis through multi-component, multi-target, and multi-channel synergy. Baishideng Publishing Group Inc 2022-07-26 2022-07-26 /pmc/articles/PMC9353920/ /pubmed/36158000 http://dx.doi.org/10.12998/wjcc.v10.i21.7224 Text en ©The Author(s) 2022. Published by Baishideng Publishing Group Inc. All rights reserved. https://creativecommons.org/licenses/by-nc/4.0/This article is an open-access article that was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution NonCommercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: https://creativecommons.org/Licenses/by-nc/4.0/
spellingShingle Clinical and Translational Research
Wang, Zi
Zhang, Hao-Min
Guo, Yuan-Rui
Li, Ling-Ling
Molecular mechanisms of Biyu decoction as treatment for psoriasis: A network pharmacology and molecular docking study
title Molecular mechanisms of Biyu decoction as treatment for psoriasis: A network pharmacology and molecular docking study
title_full Molecular mechanisms of Biyu decoction as treatment for psoriasis: A network pharmacology and molecular docking study
title_fullStr Molecular mechanisms of Biyu decoction as treatment for psoriasis: A network pharmacology and molecular docking study
title_full_unstemmed Molecular mechanisms of Biyu decoction as treatment for psoriasis: A network pharmacology and molecular docking study
title_short Molecular mechanisms of Biyu decoction as treatment for psoriasis: A network pharmacology and molecular docking study
title_sort molecular mechanisms of biyu decoction as treatment for psoriasis: a network pharmacology and molecular docking study
topic Clinical and Translational Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9353920/
https://www.ncbi.nlm.nih.gov/pubmed/36158000
http://dx.doi.org/10.12998/wjcc.v10.i21.7224
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