Cargando…

Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant

Laccases are regarded as versatile green biocatalysts, and recent scientific research has focused on improving their redox potential for broader industrial and environmental applications. The density functional theory (DFT) quantum mechanics approach, sufficiently rigorous and efficient for the calc...

Descripción completa

Detalles Bibliográficos
Autores principales: Jiang, Qixuan, Cui, Ziheng, Wei, Ren, Nie, Kaili, Xu, Haijun, Liu, Luo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9354848/
https://www.ncbi.nlm.nih.gov/pubmed/35935497
http://dx.doi.org/10.3389/fbioe.2022.957694
_version_ 1784763161873743872
author Jiang, Qixuan
Cui, Ziheng
Wei, Ren
Nie, Kaili
Xu, Haijun
Liu, Luo
author_facet Jiang, Qixuan
Cui, Ziheng
Wei, Ren
Nie, Kaili
Xu, Haijun
Liu, Luo
author_sort Jiang, Qixuan
collection PubMed
description Laccases are regarded as versatile green biocatalysts, and recent scientific research has focused on improving their redox potential for broader industrial and environmental applications. The density functional theory (DFT) quantum mechanics approach, sufficiently rigorous and efficient for the calculation of electronic structures, is conducted to better comprehend the connection between the redox potential and the atomic structural feature of laccases. According to the crystal structure of wild type laccase CueO and its variant, a truncated miniature cluster model method was established in this research. On the basic of thermodynamic cycle, the overall Gibbs free energy variations before and after the one-electron reduction were calculated. It turned out that the trends of redox potentials to increase after variant predicted by the theoretical calculations correlated well with those obtained by experiments, thereby validating the feasibility of this cluster model method for simulating the redox potentials of laccases.
format Online
Article
Text
id pubmed-9354848
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-93548482022-08-06 Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant Jiang, Qixuan Cui, Ziheng Wei, Ren Nie, Kaili Xu, Haijun Liu, Luo Front Bioeng Biotechnol Bioengineering and Biotechnology Laccases are regarded as versatile green biocatalysts, and recent scientific research has focused on improving their redox potential for broader industrial and environmental applications. The density functional theory (DFT) quantum mechanics approach, sufficiently rigorous and efficient for the calculation of electronic structures, is conducted to better comprehend the connection between the redox potential and the atomic structural feature of laccases. According to the crystal structure of wild type laccase CueO and its variant, a truncated miniature cluster model method was established in this research. On the basic of thermodynamic cycle, the overall Gibbs free energy variations before and after the one-electron reduction were calculated. It turned out that the trends of redox potentials to increase after variant predicted by the theoretical calculations correlated well with those obtained by experiments, thereby validating the feasibility of this cluster model method for simulating the redox potentials of laccases. Frontiers Media S.A. 2022-07-22 /pmc/articles/PMC9354848/ /pubmed/35935497 http://dx.doi.org/10.3389/fbioe.2022.957694 Text en Copyright © 2022 Jiang, Cui, Wei, Nie, Xu and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Jiang, Qixuan
Cui, Ziheng
Wei, Ren
Nie, Kaili
Xu, Haijun
Liu, Luo
Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant
title Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant
title_full Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant
title_fullStr Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant
title_full_unstemmed Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant
title_short Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant
title_sort feasible cluster model method for simulating the redox potentials of laccase cueo and its variant
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9354848/
https://www.ncbi.nlm.nih.gov/pubmed/35935497
http://dx.doi.org/10.3389/fbioe.2022.957694
work_keys_str_mv AT jiangqixuan feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant
AT cuiziheng feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant
AT weiren feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant
AT niekaili feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant
AT xuhaijun feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant
AT liuluo feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant