Cargando…
Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant
Laccases are regarded as versatile green biocatalysts, and recent scientific research has focused on improving their redox potential for broader industrial and environmental applications. The density functional theory (DFT) quantum mechanics approach, sufficiently rigorous and efficient for the calc...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9354848/ https://www.ncbi.nlm.nih.gov/pubmed/35935497 http://dx.doi.org/10.3389/fbioe.2022.957694 |
_version_ | 1784763161873743872 |
---|---|
author | Jiang, Qixuan Cui, Ziheng Wei, Ren Nie, Kaili Xu, Haijun Liu, Luo |
author_facet | Jiang, Qixuan Cui, Ziheng Wei, Ren Nie, Kaili Xu, Haijun Liu, Luo |
author_sort | Jiang, Qixuan |
collection | PubMed |
description | Laccases are regarded as versatile green biocatalysts, and recent scientific research has focused on improving their redox potential for broader industrial and environmental applications. The density functional theory (DFT) quantum mechanics approach, sufficiently rigorous and efficient for the calculation of electronic structures, is conducted to better comprehend the connection between the redox potential and the atomic structural feature of laccases. According to the crystal structure of wild type laccase CueO and its variant, a truncated miniature cluster model method was established in this research. On the basic of thermodynamic cycle, the overall Gibbs free energy variations before and after the one-electron reduction were calculated. It turned out that the trends of redox potentials to increase after variant predicted by the theoretical calculations correlated well with those obtained by experiments, thereby validating the feasibility of this cluster model method for simulating the redox potentials of laccases. |
format | Online Article Text |
id | pubmed-9354848 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93548482022-08-06 Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant Jiang, Qixuan Cui, Ziheng Wei, Ren Nie, Kaili Xu, Haijun Liu, Luo Front Bioeng Biotechnol Bioengineering and Biotechnology Laccases are regarded as versatile green biocatalysts, and recent scientific research has focused on improving their redox potential for broader industrial and environmental applications. The density functional theory (DFT) quantum mechanics approach, sufficiently rigorous and efficient for the calculation of electronic structures, is conducted to better comprehend the connection between the redox potential and the atomic structural feature of laccases. According to the crystal structure of wild type laccase CueO and its variant, a truncated miniature cluster model method was established in this research. On the basic of thermodynamic cycle, the overall Gibbs free energy variations before and after the one-electron reduction were calculated. It turned out that the trends of redox potentials to increase after variant predicted by the theoretical calculations correlated well with those obtained by experiments, thereby validating the feasibility of this cluster model method for simulating the redox potentials of laccases. Frontiers Media S.A. 2022-07-22 /pmc/articles/PMC9354848/ /pubmed/35935497 http://dx.doi.org/10.3389/fbioe.2022.957694 Text en Copyright © 2022 Jiang, Cui, Wei, Nie, Xu and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Bioengineering and Biotechnology Jiang, Qixuan Cui, Ziheng Wei, Ren Nie, Kaili Xu, Haijun Liu, Luo Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant |
title | Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant |
title_full | Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant |
title_fullStr | Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant |
title_full_unstemmed | Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant |
title_short | Feasible Cluster Model Method for Simulating the Redox Potentials of Laccase CueO and Its Variant |
title_sort | feasible cluster model method for simulating the redox potentials of laccase cueo and its variant |
topic | Bioengineering and Biotechnology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9354848/ https://www.ncbi.nlm.nih.gov/pubmed/35935497 http://dx.doi.org/10.3389/fbioe.2022.957694 |
work_keys_str_mv | AT jiangqixuan feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant AT cuiziheng feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant AT weiren feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant AT niekaili feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant AT xuhaijun feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant AT liuluo feasibleclustermodelmethodforsimulatingtheredoxpotentialsoflaccasecueoanditsvariant |