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Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area

BACKGROUND AND AIMS: Land abandonment and selective farming are two common management methods to restore the soil conditions of low-pollution farmland in mining areas. The soil bacterial community plays an important role in farmland soil restoration; however, few studies have compared the compositio...

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Autores principales: Duan, Renyan, Du, Yihuan, Chen, Zhiwei, Zhang, Yaqi, Hu, Wei, Yang, Li, Xiang, Guohong, Luo, Yucai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9355163/
https://www.ncbi.nlm.nih.gov/pubmed/35935219
http://dx.doi.org/10.3389/fmicb.2022.953624
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author Duan, Renyan
Du, Yihuan
Chen, Zhiwei
Zhang, Yaqi
Hu, Wei
Yang, Li
Xiang, Guohong
Luo, Yucai
author_facet Duan, Renyan
Du, Yihuan
Chen, Zhiwei
Zhang, Yaqi
Hu, Wei
Yang, Li
Xiang, Guohong
Luo, Yucai
author_sort Duan, Renyan
collection PubMed
description BACKGROUND AND AIMS: Land abandonment and selective farming are two common management methods to restore the soil conditions of low-pollution farmland in mining areas. The soil bacterial community plays an important role in farmland soil restoration; however, few studies have compared the composition and diversity of soil bacteria between the abandoned farmlands (AFS) and selective-farming farmlands (FFS). Here, the effects of AFS and FFS on soil properties and bacterial diversity were evaluated in an antimony (Sb) mining area in southern China. This study aimed to identify effective land management methods in terms of positive or negative changes in soil environment and bacterial diversity. METHODS: 16S rRNA high-throughput sequencing was used to compare the diversity and composition of soil bacteria between AFS and FFS in the Xikuangshan (the largest Sb mine in the world). RESULTS: Compared to AFS, FFS had higher Sb concentration and nutritional properties (e.g., available N, P, and K) and lower Zn concentration (p < 0.05). The bacterial alpha diversity including Chao1 index, Simpson index, Shannon index and Pielou(−)e index in FFS was higher than AFS (p < 0.05). At the phylum level, FFS had higher relative abundances of Chloroflexi, Acidobacteria, Gemmatimonadetes, and Rokubacteria, and lower relative abundances of Firmicutes, Actinobacteria, and Bacteroidetes. At the genus level, FFS had higher relative abundances of Acidothermus, Haliangium, and Rokubacteriales, and lower relative abundances of Bacillus, Rhodococcus, Sphingomonas, and 67-14. Redundancy analysis indicated that soil heavy metal content and soil fertility were closely correlated with the soil bacterial community. Altogether, selective farming of low-pollution farmland in the mining area can improve soil properties and soil bacterial diversity.
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spelling pubmed-93551632022-08-06 Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area Duan, Renyan Du, Yihuan Chen, Zhiwei Zhang, Yaqi Hu, Wei Yang, Li Xiang, Guohong Luo, Yucai Front Microbiol Microbiology BACKGROUND AND AIMS: Land abandonment and selective farming are two common management methods to restore the soil conditions of low-pollution farmland in mining areas. The soil bacterial community plays an important role in farmland soil restoration; however, few studies have compared the composition and diversity of soil bacteria between the abandoned farmlands (AFS) and selective-farming farmlands (FFS). Here, the effects of AFS and FFS on soil properties and bacterial diversity were evaluated in an antimony (Sb) mining area in southern China. This study aimed to identify effective land management methods in terms of positive or negative changes in soil environment and bacterial diversity. METHODS: 16S rRNA high-throughput sequencing was used to compare the diversity and composition of soil bacteria between AFS and FFS in the Xikuangshan (the largest Sb mine in the world). RESULTS: Compared to AFS, FFS had higher Sb concentration and nutritional properties (e.g., available N, P, and K) and lower Zn concentration (p < 0.05). The bacterial alpha diversity including Chao1 index, Simpson index, Shannon index and Pielou(−)e index in FFS was higher than AFS (p < 0.05). At the phylum level, FFS had higher relative abundances of Chloroflexi, Acidobacteria, Gemmatimonadetes, and Rokubacteria, and lower relative abundances of Firmicutes, Actinobacteria, and Bacteroidetes. At the genus level, FFS had higher relative abundances of Acidothermus, Haliangium, and Rokubacteriales, and lower relative abundances of Bacillus, Rhodococcus, Sphingomonas, and 67-14. Redundancy analysis indicated that soil heavy metal content and soil fertility were closely correlated with the soil bacterial community. Altogether, selective farming of low-pollution farmland in the mining area can improve soil properties and soil bacterial diversity. Frontiers Media S.A. 2022-07-22 /pmc/articles/PMC9355163/ /pubmed/35935219 http://dx.doi.org/10.3389/fmicb.2022.953624 Text en Copyright © 2022 Duan, Du, Chen, Zhang, Hu, Yang, Xiang and Luo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Duan, Renyan
Du, Yihuan
Chen, Zhiwei
Zhang, Yaqi
Hu, Wei
Yang, Li
Xiang, Guohong
Luo, Yucai
Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area
title Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area
title_full Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area
title_fullStr Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area
title_full_unstemmed Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area
title_short Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area
title_sort diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9355163/
https://www.ncbi.nlm.nih.gov/pubmed/35935219
http://dx.doi.org/10.3389/fmicb.2022.953624
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