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Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area
BACKGROUND AND AIMS: Land abandonment and selective farming are two common management methods to restore the soil conditions of low-pollution farmland in mining areas. The soil bacterial community plays an important role in farmland soil restoration; however, few studies have compared the compositio...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9355163/ https://www.ncbi.nlm.nih.gov/pubmed/35935219 http://dx.doi.org/10.3389/fmicb.2022.953624 |
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author | Duan, Renyan Du, Yihuan Chen, Zhiwei Zhang, Yaqi Hu, Wei Yang, Li Xiang, Guohong Luo, Yucai |
author_facet | Duan, Renyan Du, Yihuan Chen, Zhiwei Zhang, Yaqi Hu, Wei Yang, Li Xiang, Guohong Luo, Yucai |
author_sort | Duan, Renyan |
collection | PubMed |
description | BACKGROUND AND AIMS: Land abandonment and selective farming are two common management methods to restore the soil conditions of low-pollution farmland in mining areas. The soil bacterial community plays an important role in farmland soil restoration; however, few studies have compared the composition and diversity of soil bacteria between the abandoned farmlands (AFS) and selective-farming farmlands (FFS). Here, the effects of AFS and FFS on soil properties and bacterial diversity were evaluated in an antimony (Sb) mining area in southern China. This study aimed to identify effective land management methods in terms of positive or negative changes in soil environment and bacterial diversity. METHODS: 16S rRNA high-throughput sequencing was used to compare the diversity and composition of soil bacteria between AFS and FFS in the Xikuangshan (the largest Sb mine in the world). RESULTS: Compared to AFS, FFS had higher Sb concentration and nutritional properties (e.g., available N, P, and K) and lower Zn concentration (p < 0.05). The bacterial alpha diversity including Chao1 index, Simpson index, Shannon index and Pielou(−)e index in FFS was higher than AFS (p < 0.05). At the phylum level, FFS had higher relative abundances of Chloroflexi, Acidobacteria, Gemmatimonadetes, and Rokubacteria, and lower relative abundances of Firmicutes, Actinobacteria, and Bacteroidetes. At the genus level, FFS had higher relative abundances of Acidothermus, Haliangium, and Rokubacteriales, and lower relative abundances of Bacillus, Rhodococcus, Sphingomonas, and 67-14. Redundancy analysis indicated that soil heavy metal content and soil fertility were closely correlated with the soil bacterial community. Altogether, selective farming of low-pollution farmland in the mining area can improve soil properties and soil bacterial diversity. |
format | Online Article Text |
id | pubmed-9355163 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93551632022-08-06 Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area Duan, Renyan Du, Yihuan Chen, Zhiwei Zhang, Yaqi Hu, Wei Yang, Li Xiang, Guohong Luo, Yucai Front Microbiol Microbiology BACKGROUND AND AIMS: Land abandonment and selective farming are two common management methods to restore the soil conditions of low-pollution farmland in mining areas. The soil bacterial community plays an important role in farmland soil restoration; however, few studies have compared the composition and diversity of soil bacteria between the abandoned farmlands (AFS) and selective-farming farmlands (FFS). Here, the effects of AFS and FFS on soil properties and bacterial diversity were evaluated in an antimony (Sb) mining area in southern China. This study aimed to identify effective land management methods in terms of positive or negative changes in soil environment and bacterial diversity. METHODS: 16S rRNA high-throughput sequencing was used to compare the diversity and composition of soil bacteria between AFS and FFS in the Xikuangshan (the largest Sb mine in the world). RESULTS: Compared to AFS, FFS had higher Sb concentration and nutritional properties (e.g., available N, P, and K) and lower Zn concentration (p < 0.05). The bacterial alpha diversity including Chao1 index, Simpson index, Shannon index and Pielou(−)e index in FFS was higher than AFS (p < 0.05). At the phylum level, FFS had higher relative abundances of Chloroflexi, Acidobacteria, Gemmatimonadetes, and Rokubacteria, and lower relative abundances of Firmicutes, Actinobacteria, and Bacteroidetes. At the genus level, FFS had higher relative abundances of Acidothermus, Haliangium, and Rokubacteriales, and lower relative abundances of Bacillus, Rhodococcus, Sphingomonas, and 67-14. Redundancy analysis indicated that soil heavy metal content and soil fertility were closely correlated with the soil bacterial community. Altogether, selective farming of low-pollution farmland in the mining area can improve soil properties and soil bacterial diversity. Frontiers Media S.A. 2022-07-22 /pmc/articles/PMC9355163/ /pubmed/35935219 http://dx.doi.org/10.3389/fmicb.2022.953624 Text en Copyright © 2022 Duan, Du, Chen, Zhang, Hu, Yang, Xiang and Luo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Duan, Renyan Du, Yihuan Chen, Zhiwei Zhang, Yaqi Hu, Wei Yang, Li Xiang, Guohong Luo, Yucai Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area |
title | Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area |
title_full | Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area |
title_fullStr | Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area |
title_full_unstemmed | Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area |
title_short | Diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area |
title_sort | diversity and composition of soil bacteria between abandoned and selective-farming farmlands in an antimony mining area |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9355163/ https://www.ncbi.nlm.nih.gov/pubmed/35935219 http://dx.doi.org/10.3389/fmicb.2022.953624 |
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