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Deep learning-based noise filtering toward millisecond order imaging by using scanning transmission electron microscopy
Application of scanning transmission electron microscopy (STEM) to in situ observation will be essential in the current and emerging data-driven materials science by taking STEM’s high affinity with various analytical options into account. As is well known, STEM’s image acquisition time needs to be...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356044/ https://www.ncbi.nlm.nih.gov/pubmed/35931705 http://dx.doi.org/10.1038/s41598-022-17360-3 |
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author | Ihara, Shiro Saito, Hikaru Yoshinaga, Mizumo Avala, Lavakumar Murayama, Mitsuhiro |
author_facet | Ihara, Shiro Saito, Hikaru Yoshinaga, Mizumo Avala, Lavakumar Murayama, Mitsuhiro |
author_sort | Ihara, Shiro |
collection | PubMed |
description | Application of scanning transmission electron microscopy (STEM) to in situ observation will be essential in the current and emerging data-driven materials science by taking STEM’s high affinity with various analytical options into account. As is well known, STEM’s image acquisition time needs to be further shortened to capture a targeted phenomenon in real-time as STEM’s current temporal resolution is far below the conventional TEM’s. However, rapid image acquisition in the millisecond per frame or faster generally causes image distortion, poor electron signals, and unidirectional blurring, which are obstacles for realizing video-rate STEM observation. Here we show an image correction framework integrating deep learning (DL)-based denoising and image distortion correction schemes optimized for STEM rapid image acquisition. By comparing a series of distortion corrected rapid scan images with corresponding regular scan speed images, the trained DL network is shown to remove not only the statistical noise but also the unidirectional blurring. This result demonstrates that rapid as well as high-quality image acquisition by STEM without hardware modification can be established by the DL. The DL-based noise filter could be applied to in-situ observation, such as dislocation activities under external stimuli, with high spatio-temporal resolution. |
format | Online Article Text |
id | pubmed-9356044 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-93560442022-08-07 Deep learning-based noise filtering toward millisecond order imaging by using scanning transmission electron microscopy Ihara, Shiro Saito, Hikaru Yoshinaga, Mizumo Avala, Lavakumar Murayama, Mitsuhiro Sci Rep Article Application of scanning transmission electron microscopy (STEM) to in situ observation will be essential in the current and emerging data-driven materials science by taking STEM’s high affinity with various analytical options into account. As is well known, STEM’s image acquisition time needs to be further shortened to capture a targeted phenomenon in real-time as STEM’s current temporal resolution is far below the conventional TEM’s. However, rapid image acquisition in the millisecond per frame or faster generally causes image distortion, poor electron signals, and unidirectional blurring, which are obstacles for realizing video-rate STEM observation. Here we show an image correction framework integrating deep learning (DL)-based denoising and image distortion correction schemes optimized for STEM rapid image acquisition. By comparing a series of distortion corrected rapid scan images with corresponding regular scan speed images, the trained DL network is shown to remove not only the statistical noise but also the unidirectional blurring. This result demonstrates that rapid as well as high-quality image acquisition by STEM without hardware modification can be established by the DL. The DL-based noise filter could be applied to in-situ observation, such as dislocation activities under external stimuli, with high spatio-temporal resolution. Nature Publishing Group UK 2022-08-05 /pmc/articles/PMC9356044/ /pubmed/35931705 http://dx.doi.org/10.1038/s41598-022-17360-3 Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Ihara, Shiro Saito, Hikaru Yoshinaga, Mizumo Avala, Lavakumar Murayama, Mitsuhiro Deep learning-based noise filtering toward millisecond order imaging by using scanning transmission electron microscopy |
title | Deep learning-based noise filtering toward millisecond order imaging by using scanning transmission electron microscopy |
title_full | Deep learning-based noise filtering toward millisecond order imaging by using scanning transmission electron microscopy |
title_fullStr | Deep learning-based noise filtering toward millisecond order imaging by using scanning transmission electron microscopy |
title_full_unstemmed | Deep learning-based noise filtering toward millisecond order imaging by using scanning transmission electron microscopy |
title_short | Deep learning-based noise filtering toward millisecond order imaging by using scanning transmission electron microscopy |
title_sort | deep learning-based noise filtering toward millisecond order imaging by using scanning transmission electron microscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356044/ https://www.ncbi.nlm.nih.gov/pubmed/35931705 http://dx.doi.org/10.1038/s41598-022-17360-3 |
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