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Canal-Net for automatic and robust 3D segmentation of mandibular canals in CBCT images using a continuity-aware contextual network

The purpose of this study was to propose a continuity-aware contextual network (Canal-Net) for the automatic and robust 3D segmentation of the mandibular canal (MC) with high consistent accuracy throughout the entire MC volume in cone-beam CT (CBCT) images. The Canal-Net was designed based on a 3D U...

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Autores principales: Jeoun, Bo-Soung, Yang, Su, Lee, Sang-Jeong, Kim, Tae-Il, Kim, Jun-Min, Kim, Jo-Eun, Huh, Kyung-Hoe, Lee, Sam-Sun, Heo, Min-Suk, Yi, Won-Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356068/
https://www.ncbi.nlm.nih.gov/pubmed/35931733
http://dx.doi.org/10.1038/s41598-022-17341-6
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author Jeoun, Bo-Soung
Yang, Su
Lee, Sang-Jeong
Kim, Tae-Il
Kim, Jun-Min
Kim, Jo-Eun
Huh, Kyung-Hoe
Lee, Sam-Sun
Heo, Min-Suk
Yi, Won-Jin
author_facet Jeoun, Bo-Soung
Yang, Su
Lee, Sang-Jeong
Kim, Tae-Il
Kim, Jun-Min
Kim, Jo-Eun
Huh, Kyung-Hoe
Lee, Sam-Sun
Heo, Min-Suk
Yi, Won-Jin
author_sort Jeoun, Bo-Soung
collection PubMed
description The purpose of this study was to propose a continuity-aware contextual network (Canal-Net) for the automatic and robust 3D segmentation of the mandibular canal (MC) with high consistent accuracy throughout the entire MC volume in cone-beam CT (CBCT) images. The Canal-Net was designed based on a 3D U-Net with bidirectional convolutional long short-term memory (ConvLSTM) under a multi-task learning framework. Specifically, the Canal-Net learned the 3D anatomical context information of the MC by incorporating spatio-temporal features from ConvLSTM, and also the structural continuity of the overall MC volume under a multi-task learning framework using multi-planar projection losses complementally. The Canal-Net showed higher segmentation accuracies in 2D and 3D performance metrics (p < 0.05), and especially, a significant improvement in Dice similarity coefficient scores and mean curve distance (p < 0.05) throughout the entire MC volume compared to other popular deep learning networks. As a result, the Canal-Net achieved high consistent accuracy in 3D segmentations of the entire MC in spite of the areas of low visibility by the unclear and ambiguous cortical bone layer. Therefore, the Canal-Net demonstrated the automatic and robust 3D segmentation of the entire MC volume by improving structural continuity and boundary details of the MC in CBCT images.
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spelling pubmed-93560682022-08-07 Canal-Net for automatic and robust 3D segmentation of mandibular canals in CBCT images using a continuity-aware contextual network Jeoun, Bo-Soung Yang, Su Lee, Sang-Jeong Kim, Tae-Il Kim, Jun-Min Kim, Jo-Eun Huh, Kyung-Hoe Lee, Sam-Sun Heo, Min-Suk Yi, Won-Jin Sci Rep Article The purpose of this study was to propose a continuity-aware contextual network (Canal-Net) for the automatic and robust 3D segmentation of the mandibular canal (MC) with high consistent accuracy throughout the entire MC volume in cone-beam CT (CBCT) images. The Canal-Net was designed based on a 3D U-Net with bidirectional convolutional long short-term memory (ConvLSTM) under a multi-task learning framework. Specifically, the Canal-Net learned the 3D anatomical context information of the MC by incorporating spatio-temporal features from ConvLSTM, and also the structural continuity of the overall MC volume under a multi-task learning framework using multi-planar projection losses complementally. The Canal-Net showed higher segmentation accuracies in 2D and 3D performance metrics (p < 0.05), and especially, a significant improvement in Dice similarity coefficient scores and mean curve distance (p < 0.05) throughout the entire MC volume compared to other popular deep learning networks. As a result, the Canal-Net achieved high consistent accuracy in 3D segmentations of the entire MC in spite of the areas of low visibility by the unclear and ambiguous cortical bone layer. Therefore, the Canal-Net demonstrated the automatic and robust 3D segmentation of the entire MC volume by improving structural continuity and boundary details of the MC in CBCT images. Nature Publishing Group UK 2022-08-05 /pmc/articles/PMC9356068/ /pubmed/35931733 http://dx.doi.org/10.1038/s41598-022-17341-6 Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Jeoun, Bo-Soung
Yang, Su
Lee, Sang-Jeong
Kim, Tae-Il
Kim, Jun-Min
Kim, Jo-Eun
Huh, Kyung-Hoe
Lee, Sam-Sun
Heo, Min-Suk
Yi, Won-Jin
Canal-Net for automatic and robust 3D segmentation of mandibular canals in CBCT images using a continuity-aware contextual network
title Canal-Net for automatic and robust 3D segmentation of mandibular canals in CBCT images using a continuity-aware contextual network
title_full Canal-Net for automatic and robust 3D segmentation of mandibular canals in CBCT images using a continuity-aware contextual network
title_fullStr Canal-Net for automatic and robust 3D segmentation of mandibular canals in CBCT images using a continuity-aware contextual network
title_full_unstemmed Canal-Net for automatic and robust 3D segmentation of mandibular canals in CBCT images using a continuity-aware contextual network
title_short Canal-Net for automatic and robust 3D segmentation of mandibular canals in CBCT images using a continuity-aware contextual network
title_sort canal-net for automatic and robust 3d segmentation of mandibular canals in cbct images using a continuity-aware contextual network
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356068/
https://www.ncbi.nlm.nih.gov/pubmed/35931733
http://dx.doi.org/10.1038/s41598-022-17341-6
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