Cargando…

DKPNet41: Directed knight pattern network-based cough sound classification model for automatic disease diagnosis

PROBLEM: Cough-based disease detection is a hot research topic for machine learning, and much research has been published on the automatic detection of Covid-19. However, these studies are useful for the diagnosis of different diseases. AIM: In this work, we collected a new and large (n=642 subjects...

Descripción completa

Detalles Bibliográficos
Autores principales: Kuluozturk, Mutlu, Kobat, Mehmet Ali, Barua, Prabal Datta, Dogan, Sengul, Tuncer, Turker, Tan, Ru-San, Ciaccio, Edward J., Acharya, U Rajendra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IPEM. Published by Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356574/
https://www.ncbi.nlm.nih.gov/pubmed/35989223
http://dx.doi.org/10.1016/j.medengphy.2022.103870
_version_ 1784763548500492288
author Kuluozturk, Mutlu
Kobat, Mehmet Ali
Barua, Prabal Datta
Dogan, Sengul
Tuncer, Turker
Tan, Ru-San
Ciaccio, Edward J.
Acharya, U Rajendra
author_facet Kuluozturk, Mutlu
Kobat, Mehmet Ali
Barua, Prabal Datta
Dogan, Sengul
Tuncer, Turker
Tan, Ru-San
Ciaccio, Edward J.
Acharya, U Rajendra
author_sort Kuluozturk, Mutlu
collection PubMed
description PROBLEM: Cough-based disease detection is a hot research topic for machine learning, and much research has been published on the automatic detection of Covid-19. However, these studies are useful for the diagnosis of different diseases. AIM: In this work, we collected a new and large (n=642 subjects) cough sound dataset comprising four diagnostic categories: ‘Covid-19’, ‘heart failure’, ‘acute asthma’, and ‘healthy’, and used it to train, validate, and test a novel model designed for automatic detection. METHOD: The model consists of four main components: novel feature generation based on a specifically directed knight pattern (DKP), signal decomposition using four pooling methods, feature selection using iterative neighborhood analysis (INCA), and classification using the k-nearest neighbor (kNN) classifier with ten-fold cross-validation. Multilevel multiple pooling decomposition combined with DKP yielded 41 feature vectors (40 extracted plus one original cough sound). From these, the ten best feature vectors were selected. Based on each vector's misclassification rate, redundant feature vectors were eliminated and then merged. The merged vector's most informative features automatically selected using INCA were input to a standard kNN classifier. RESULTS: The model, called DKPNet41, attained a high accuracy of 99.39% for cough sound-based multiclass classification of the four categories. CONCLUSIONS: The results obtained in the study showed that the DKPNet41 model automatically and efficiently classifies cough sounds for disease diagnosis.
format Online
Article
Text
id pubmed-9356574
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher IPEM. Published by Elsevier Ltd.
record_format MEDLINE/PubMed
spelling pubmed-93565742022-08-07 DKPNet41: Directed knight pattern network-based cough sound classification model for automatic disease diagnosis Kuluozturk, Mutlu Kobat, Mehmet Ali Barua, Prabal Datta Dogan, Sengul Tuncer, Turker Tan, Ru-San Ciaccio, Edward J. Acharya, U Rajendra Med Eng Phys Article PROBLEM: Cough-based disease detection is a hot research topic for machine learning, and much research has been published on the automatic detection of Covid-19. However, these studies are useful for the diagnosis of different diseases. AIM: In this work, we collected a new and large (n=642 subjects) cough sound dataset comprising four diagnostic categories: ‘Covid-19’, ‘heart failure’, ‘acute asthma’, and ‘healthy’, and used it to train, validate, and test a novel model designed for automatic detection. METHOD: The model consists of four main components: novel feature generation based on a specifically directed knight pattern (DKP), signal decomposition using four pooling methods, feature selection using iterative neighborhood analysis (INCA), and classification using the k-nearest neighbor (kNN) classifier with ten-fold cross-validation. Multilevel multiple pooling decomposition combined with DKP yielded 41 feature vectors (40 extracted plus one original cough sound). From these, the ten best feature vectors were selected. Based on each vector's misclassification rate, redundant feature vectors were eliminated and then merged. The merged vector's most informative features automatically selected using INCA were input to a standard kNN classifier. RESULTS: The model, called DKPNet41, attained a high accuracy of 99.39% for cough sound-based multiclass classification of the four categories. CONCLUSIONS: The results obtained in the study showed that the DKPNet41 model automatically and efficiently classifies cough sounds for disease diagnosis. IPEM. Published by Elsevier Ltd. 2022-12 2022-08-06 /pmc/articles/PMC9356574/ /pubmed/35989223 http://dx.doi.org/10.1016/j.medengphy.2022.103870 Text en © 2022 IPEM. Published by Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Kuluozturk, Mutlu
Kobat, Mehmet Ali
Barua, Prabal Datta
Dogan, Sengul
Tuncer, Turker
Tan, Ru-San
Ciaccio, Edward J.
Acharya, U Rajendra
DKPNet41: Directed knight pattern network-based cough sound classification model for automatic disease diagnosis
title DKPNet41: Directed knight pattern network-based cough sound classification model for automatic disease diagnosis
title_full DKPNet41: Directed knight pattern network-based cough sound classification model for automatic disease diagnosis
title_fullStr DKPNet41: Directed knight pattern network-based cough sound classification model for automatic disease diagnosis
title_full_unstemmed DKPNet41: Directed knight pattern network-based cough sound classification model for automatic disease diagnosis
title_short DKPNet41: Directed knight pattern network-based cough sound classification model for automatic disease diagnosis
title_sort dkpnet41: directed knight pattern network-based cough sound classification model for automatic disease diagnosis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356574/
https://www.ncbi.nlm.nih.gov/pubmed/35989223
http://dx.doi.org/10.1016/j.medengphy.2022.103870
work_keys_str_mv AT kuluozturkmutlu dkpnet41directedknightpatternnetworkbasedcoughsoundclassificationmodelforautomaticdiseasediagnosis
AT kobatmehmetali dkpnet41directedknightpatternnetworkbasedcoughsoundclassificationmodelforautomaticdiseasediagnosis
AT baruaprabaldatta dkpnet41directedknightpatternnetworkbasedcoughsoundclassificationmodelforautomaticdiseasediagnosis
AT dogansengul dkpnet41directedknightpatternnetworkbasedcoughsoundclassificationmodelforautomaticdiseasediagnosis
AT tuncerturker dkpnet41directedknightpatternnetworkbasedcoughsoundclassificationmodelforautomaticdiseasediagnosis
AT tanrusan dkpnet41directedknightpatternnetworkbasedcoughsoundclassificationmodelforautomaticdiseasediagnosis
AT ciaccioedwardj dkpnet41directedknightpatternnetworkbasedcoughsoundclassificationmodelforautomaticdiseasediagnosis
AT acharyaurajendra dkpnet41directedknightpatternnetworkbasedcoughsoundclassificationmodelforautomaticdiseasediagnosis