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Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study
In this work, the behavior of favipiravir (FAV) adsorption on the pristine (2,2) graphyne-based γ-nanotube (GYNT) was theoretically studied. Also, the Si-doped form (Si-GYNT) and its composite with encapsulated Fe(2)O(3) (Fe(2)O(3)@Si-GYNT) were investigated within density functional theory (DFT) ca...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Indian Chemical Society. Published by Elsevier B.V.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356577/ http://dx.doi.org/10.1016/j.jics.2022.100666 |
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author | Asgari, Mohammad Amin Bahmani, Nasim |
author_facet | Asgari, Mohammad Amin Bahmani, Nasim |
author_sort | Asgari, Mohammad Amin |
collection | PubMed |
description | In this work, the behavior of favipiravir (FAV) adsorption on the pristine (2,2) graphyne-based γ-nanotube (GYNT) was theoretically studied. Also, the Si-doped form (Si-GYNT) and its composite with encapsulated Fe(2)O(3) (Fe(2)O(3)@Si-GYNT) were investigated within density functional theory (DFT) calculations, using M05 functionals and B3LYP. It was found that FAV is weakly to moderately adsorb on the bare GYNT and Si-GYNT tube, releasing the energy of 2.2 to 19.8 kcal/mol. After FAV adsorption, the bare tube's electronic properties are changed. Localized impurity is induced at the valence and conduction levels by encapsulating a tiny Fe(2)O(3) cluster. As such, the target composite becomes a magnetic material. The binding energy between the Fe(2)O(3)@Si-GYNT and the FAV molecule becomes substantially stronger (E(ad) = -25.2 kcal/mol). We developed a drug release system in target parts of body, during protonation in the low pH of injured cells, detaching the FAV from the tube surface. The drug's reaction mechanism with Fe(2)O(3)@Si-GYNT shifts from covalence in the normal environment to hydrogen bonding in an acidic matrix. The optimized structure's natural bond orbital, quantum molecular descriptors, LUMO, HOMO and energy gap were also investigated. The recovery time can be reduced to less than 10 s by increasing the working temperature properly during the experimental test. |
format | Online Article Text |
id | pubmed-9356577 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Indian Chemical Society. Published by Elsevier B.V. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93565772022-08-07 Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study Asgari, Mohammad Amin Bahmani, Nasim Journal of the Indian Chemical Society Article In this work, the behavior of favipiravir (FAV) adsorption on the pristine (2,2) graphyne-based γ-nanotube (GYNT) was theoretically studied. Also, the Si-doped form (Si-GYNT) and its composite with encapsulated Fe(2)O(3) (Fe(2)O(3)@Si-GYNT) were investigated within density functional theory (DFT) calculations, using M05 functionals and B3LYP. It was found that FAV is weakly to moderately adsorb on the bare GYNT and Si-GYNT tube, releasing the energy of 2.2 to 19.8 kcal/mol. After FAV adsorption, the bare tube's electronic properties are changed. Localized impurity is induced at the valence and conduction levels by encapsulating a tiny Fe(2)O(3) cluster. As such, the target composite becomes a magnetic material. The binding energy between the Fe(2)O(3)@Si-GYNT and the FAV molecule becomes substantially stronger (E(ad) = -25.2 kcal/mol). We developed a drug release system in target parts of body, during protonation in the low pH of injured cells, detaching the FAV from the tube surface. The drug's reaction mechanism with Fe(2)O(3)@Si-GYNT shifts from covalence in the normal environment to hydrogen bonding in an acidic matrix. The optimized structure's natural bond orbital, quantum molecular descriptors, LUMO, HOMO and energy gap were also investigated. The recovery time can be reduced to less than 10 s by increasing the working temperature properly during the experimental test. Indian Chemical Society. Published by Elsevier B.V. 2022-09 2022-08-06 /pmc/articles/PMC9356577/ http://dx.doi.org/10.1016/j.jics.2022.100666 Text en © 2022 Indian Chemical Society. Published by Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Asgari, Mohammad Amin Bahmani, Nasim Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study |
title | Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study |
title_full | Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study |
title_fullStr | Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study |
title_full_unstemmed | Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study |
title_short | Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study |
title_sort | synergistic effect of si-doping and fe(2)o(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for covid-19: a dft study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356577/ http://dx.doi.org/10.1016/j.jics.2022.100666 |
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