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Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study

In this work, the behavior of favipiravir (FAV) adsorption on the pristine (2,2) graphyne-based γ-nanotube (GYNT) was theoretically studied. Also, the Si-doped form (Si-GYNT) and its composite with encapsulated Fe(2)O(3) (Fe(2)O(3)@Si-GYNT) were investigated within density functional theory (DFT) ca...

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Autores principales: Asgari, Mohammad Amin, Bahmani, Nasim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Indian Chemical Society. Published by Elsevier B.V. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356577/
http://dx.doi.org/10.1016/j.jics.2022.100666
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author Asgari, Mohammad Amin
Bahmani, Nasim
author_facet Asgari, Mohammad Amin
Bahmani, Nasim
author_sort Asgari, Mohammad Amin
collection PubMed
description In this work, the behavior of favipiravir (FAV) adsorption on the pristine (2,2) graphyne-based γ-nanotube (GYNT) was theoretically studied. Also, the Si-doped form (Si-GYNT) and its composite with encapsulated Fe(2)O(3) (Fe(2)O(3)@Si-GYNT) were investigated within density functional theory (DFT) calculations, using M05 functionals and B3LYP. It was found that FAV is weakly to moderately adsorb on the bare GYNT and Si-GYNT tube, releasing the energy of 2.2 to 19.8 kcal/mol. After FAV adsorption, the bare tube's electronic properties are changed. Localized impurity is induced at the valence and conduction levels by encapsulating a tiny Fe(2)O(3) cluster. As such, the target composite becomes a magnetic material. The binding energy between the Fe(2)O(3)@Si-GYNT and the FAV molecule becomes substantially stronger (E(ad) = -25.2 kcal/mol). We developed a drug release system in target parts of body, during protonation in the low pH of injured cells, detaching the FAV from the tube surface. The drug's reaction mechanism with Fe(2)O(3)@Si-GYNT shifts from covalence in the normal environment to hydrogen bonding in an acidic matrix. The optimized structure's natural bond orbital, quantum molecular descriptors, LUMO, HOMO and energy gap were also investigated. The recovery time can be reduced to less than 10 s by increasing the working temperature properly during the experimental test.
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spelling pubmed-93565772022-08-07 Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study Asgari, Mohammad Amin Bahmani, Nasim Journal of the Indian Chemical Society Article In this work, the behavior of favipiravir (FAV) adsorption on the pristine (2,2) graphyne-based γ-nanotube (GYNT) was theoretically studied. Also, the Si-doped form (Si-GYNT) and its composite with encapsulated Fe(2)O(3) (Fe(2)O(3)@Si-GYNT) were investigated within density functional theory (DFT) calculations, using M05 functionals and B3LYP. It was found that FAV is weakly to moderately adsorb on the bare GYNT and Si-GYNT tube, releasing the energy of 2.2 to 19.8 kcal/mol. After FAV adsorption, the bare tube's electronic properties are changed. Localized impurity is induced at the valence and conduction levels by encapsulating a tiny Fe(2)O(3) cluster. As such, the target composite becomes a magnetic material. The binding energy between the Fe(2)O(3)@Si-GYNT and the FAV molecule becomes substantially stronger (E(ad) = -25.2 kcal/mol). We developed a drug release system in target parts of body, during protonation in the low pH of injured cells, detaching the FAV from the tube surface. The drug's reaction mechanism with Fe(2)O(3)@Si-GYNT shifts from covalence in the normal environment to hydrogen bonding in an acidic matrix. The optimized structure's natural bond orbital, quantum molecular descriptors, LUMO, HOMO and energy gap were also investigated. The recovery time can be reduced to less than 10 s by increasing the working temperature properly during the experimental test. Indian Chemical Society. Published by Elsevier B.V. 2022-09 2022-08-06 /pmc/articles/PMC9356577/ http://dx.doi.org/10.1016/j.jics.2022.100666 Text en © 2022 Indian Chemical Society. Published by Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Asgari, Mohammad Amin
Bahmani, Nasim
Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study
title Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study
title_full Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study
title_fullStr Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study
title_full_unstemmed Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study
title_short Synergistic effect of Si-doping and Fe(2)O(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for COVID-19: A DFT study
title_sort synergistic effect of si-doping and fe(2)o(3)-encapsulation on drug delivery and sensor applications of γ-graphyne nanotube toward favipiravir as an antiviral for covid-19: a dft study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9356577/
http://dx.doi.org/10.1016/j.jics.2022.100666
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