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Application of reverse vaccinology to design a multi-epitope subunit vaccine against a new strain of Aeromonas veronii
BACKGROUND: Aeromonas veronii is one of the most common pathogens of freshwater fishes that cause sepsis and ulcers. There are increasing numbers of cases showing that it is a significant zoonotic and aquatic agent. Epidemiological studies have shown that A. veronii virulence and drug tolerance have...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9358925/ https://www.ncbi.nlm.nih.gov/pubmed/35939149 http://dx.doi.org/10.1186/s43141-022-00391-8 |
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author | Islam, Sk Injamamul Mou, Moslema Jahan Sanjida, Saloa |
author_facet | Islam, Sk Injamamul Mou, Moslema Jahan Sanjida, Saloa |
author_sort | Islam, Sk Injamamul |
collection | PubMed |
description | BACKGROUND: Aeromonas veronii is one of the most common pathogens of freshwater fishes that cause sepsis and ulcers. There are increasing numbers of cases showing that it is a significant zoonotic and aquatic agent. Epidemiological studies have shown that A. veronii virulence and drug tolerance have both increased over the last few years as a result of epidemiological investigations. Cadaverine reverse transporter (CadB) and maltoporin (LamB protein) contribute to the virulence of A. veronii TH0426. TH0426 strain is currently showing severe cases on fish species, and its resistance against therapeutic has been increasing. Despite these devastating complications, there is still no effective cure or vaccine for this strain of A.veronii. RESULTS: In this regard, an immunoinformatic method was used to generate an epitope-based vaccine against this pathogen. The immunodominant epitopes were identified using the CadB and LamB protein of A. veronii. The final constructed vaccine sequence was developed to be immunogenic, non-allergenic as well as have better solubility. Molecular dynamic simulation revealed significant binding stability and structural compactness. Finally, using Escherichia coli K12 as a model, codon optimization yielded ideal GC content and a higher CAI value, which was then included in the cloning vector pET2+ (a). CONCLUSION: Altogether, our outcomes imply that the proposed peptide vaccine might be a good option for A. veronii TH0426 prophylaxis. |
format | Online Article Text |
id | pubmed-9358925 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-93589252022-08-09 Application of reverse vaccinology to design a multi-epitope subunit vaccine against a new strain of Aeromonas veronii Islam, Sk Injamamul Mou, Moslema Jahan Sanjida, Saloa J Genet Eng Biotechnol Research BACKGROUND: Aeromonas veronii is one of the most common pathogens of freshwater fishes that cause sepsis and ulcers. There are increasing numbers of cases showing that it is a significant zoonotic and aquatic agent. Epidemiological studies have shown that A. veronii virulence and drug tolerance have both increased over the last few years as a result of epidemiological investigations. Cadaverine reverse transporter (CadB) and maltoporin (LamB protein) contribute to the virulence of A. veronii TH0426. TH0426 strain is currently showing severe cases on fish species, and its resistance against therapeutic has been increasing. Despite these devastating complications, there is still no effective cure or vaccine for this strain of A.veronii. RESULTS: In this regard, an immunoinformatic method was used to generate an epitope-based vaccine against this pathogen. The immunodominant epitopes were identified using the CadB and LamB protein of A. veronii. The final constructed vaccine sequence was developed to be immunogenic, non-allergenic as well as have better solubility. Molecular dynamic simulation revealed significant binding stability and structural compactness. Finally, using Escherichia coli K12 as a model, codon optimization yielded ideal GC content and a higher CAI value, which was then included in the cloning vector pET2+ (a). CONCLUSION: Altogether, our outcomes imply that the proposed peptide vaccine might be a good option for A. veronii TH0426 prophylaxis. Springer Berlin Heidelberg 2022-08-08 /pmc/articles/PMC9358925/ /pubmed/35939149 http://dx.doi.org/10.1186/s43141-022-00391-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Islam, Sk Injamamul Mou, Moslema Jahan Sanjida, Saloa Application of reverse vaccinology to design a multi-epitope subunit vaccine against a new strain of Aeromonas veronii |
title | Application of reverse vaccinology to design a multi-epitope subunit vaccine against a new strain of Aeromonas veronii |
title_full | Application of reverse vaccinology to design a multi-epitope subunit vaccine against a new strain of Aeromonas veronii |
title_fullStr | Application of reverse vaccinology to design a multi-epitope subunit vaccine against a new strain of Aeromonas veronii |
title_full_unstemmed | Application of reverse vaccinology to design a multi-epitope subunit vaccine against a new strain of Aeromonas veronii |
title_short | Application of reverse vaccinology to design a multi-epitope subunit vaccine against a new strain of Aeromonas veronii |
title_sort | application of reverse vaccinology to design a multi-epitope subunit vaccine against a new strain of aeromonas veronii |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9358925/ https://www.ncbi.nlm.nih.gov/pubmed/35939149 http://dx.doi.org/10.1186/s43141-022-00391-8 |
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