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A distinct lipid metabolism signature of acute myeloid leukemia with prognostic value

BACKGROUND: Acute myeloid leukemia (AML) is a highly aggressive hematological malignancy characterized by extensive genetic abnormalities that might affect the prognosis and provide potential drug targets for treatment. Reprogramming of lipid metabolism plays important roles in tumorigenesis and pro...

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Autores principales: Li, Ding, Liang, Jiaming, Yang, Wei, Guo, Wenbin, Song, Wenping, Zhang, Wenzhou, Wu, Xuan, He, Baoxia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9359125/
https://www.ncbi.nlm.nih.gov/pubmed/35957912
http://dx.doi.org/10.3389/fonc.2022.876981
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author Li, Ding
Liang, Jiaming
Yang, Wei
Guo, Wenbin
Song, Wenping
Zhang, Wenzhou
Wu, Xuan
He, Baoxia
author_facet Li, Ding
Liang, Jiaming
Yang, Wei
Guo, Wenbin
Song, Wenping
Zhang, Wenzhou
Wu, Xuan
He, Baoxia
author_sort Li, Ding
collection PubMed
description BACKGROUND: Acute myeloid leukemia (AML) is a highly aggressive hematological malignancy characterized by extensive genetic abnormalities that might affect the prognosis and provide potential drug targets for treatment. Reprogramming of lipid metabolism plays important roles in tumorigenesis and progression and has been newly recognized a new hallmark of malignancy, and some related molecules in the signal pathways could be prognostic biomarkers and potential therapeutic targets for cancer treatment. However, the clinical value of lipid metabolism reprogramming in AML has not been systematically explored. In this study, we aim to explore the clinical value of lipid metabolism reprogramming and develop a prognostic risk signature for AML. METHODS: We implemented univariate Cox regression analysis to identify the prognosis-related lipid metabolism genes, and then performed LASSO analysis to develop the risk signature with six lipid metabolism-related genes (LDLRAP1, PNPLA6, DGKA, PLA2G4A, CBR1, and EBP). The risk scores of samples were calculated and divided into low- and high-risk groups by the median risk score. RESULTS: Survival analysis showed the high-risk group hold the significantly poorer outcomes than the low-risk group. The signature was validated in the GEO datasets and displayed a robust prognostic value in the stratification analysis. Multivariate analysis revealed the signature was an independent prognostic factor for AML patients and could serve as a potential prognostic biomarker in clinical evaluation. Furthermore, the risk signature was also found to be closely related to immune landscape and immunotherapy response in AML. CONCLUSIONS: Overall, we conducted a comprehensive analysis of lipid metabolism in AML and constructed a risk signature with six genes related to lipid metabolism for the malignancy, prognosis, and immune landscape of AML, and our study might contribute to better understanding in the use of metabolites and metabolic pathways as the potential prognostic biomarkers and therapeutic targets for AML.
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spelling pubmed-93591252022-08-10 A distinct lipid metabolism signature of acute myeloid leukemia with prognostic value Li, Ding Liang, Jiaming Yang, Wei Guo, Wenbin Song, Wenping Zhang, Wenzhou Wu, Xuan He, Baoxia Front Oncol Oncology BACKGROUND: Acute myeloid leukemia (AML) is a highly aggressive hematological malignancy characterized by extensive genetic abnormalities that might affect the prognosis and provide potential drug targets for treatment. Reprogramming of lipid metabolism plays important roles in tumorigenesis and progression and has been newly recognized a new hallmark of malignancy, and some related molecules in the signal pathways could be prognostic biomarkers and potential therapeutic targets for cancer treatment. However, the clinical value of lipid metabolism reprogramming in AML has not been systematically explored. In this study, we aim to explore the clinical value of lipid metabolism reprogramming and develop a prognostic risk signature for AML. METHODS: We implemented univariate Cox regression analysis to identify the prognosis-related lipid metabolism genes, and then performed LASSO analysis to develop the risk signature with six lipid metabolism-related genes (LDLRAP1, PNPLA6, DGKA, PLA2G4A, CBR1, and EBP). The risk scores of samples were calculated and divided into low- and high-risk groups by the median risk score. RESULTS: Survival analysis showed the high-risk group hold the significantly poorer outcomes than the low-risk group. The signature was validated in the GEO datasets and displayed a robust prognostic value in the stratification analysis. Multivariate analysis revealed the signature was an independent prognostic factor for AML patients and could serve as a potential prognostic biomarker in clinical evaluation. Furthermore, the risk signature was also found to be closely related to immune landscape and immunotherapy response in AML. CONCLUSIONS: Overall, we conducted a comprehensive analysis of lipid metabolism in AML and constructed a risk signature with six genes related to lipid metabolism for the malignancy, prognosis, and immune landscape of AML, and our study might contribute to better understanding in the use of metabolites and metabolic pathways as the potential prognostic biomarkers and therapeutic targets for AML. Frontiers Media S.A. 2022-07-25 /pmc/articles/PMC9359125/ /pubmed/35957912 http://dx.doi.org/10.3389/fonc.2022.876981 Text en Copyright © 2022 Li, Liang, Yang, Guo, Song, Zhang, Wu and He https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Li, Ding
Liang, Jiaming
Yang, Wei
Guo, Wenbin
Song, Wenping
Zhang, Wenzhou
Wu, Xuan
He, Baoxia
A distinct lipid metabolism signature of acute myeloid leukemia with prognostic value
title A distinct lipid metabolism signature of acute myeloid leukemia with prognostic value
title_full A distinct lipid metabolism signature of acute myeloid leukemia with prognostic value
title_fullStr A distinct lipid metabolism signature of acute myeloid leukemia with prognostic value
title_full_unstemmed A distinct lipid metabolism signature of acute myeloid leukemia with prognostic value
title_short A distinct lipid metabolism signature of acute myeloid leukemia with prognostic value
title_sort distinct lipid metabolism signature of acute myeloid leukemia with prognostic value
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9359125/
https://www.ncbi.nlm.nih.gov/pubmed/35957912
http://dx.doi.org/10.3389/fonc.2022.876981
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