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Deep residual inception encoder‐decoder network for amyloid PET harmonization
INTRODUCTION: Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and quantitative analysis. We accordingly developed and validated a deep learning model as a harmonization strategy. METHOD: A Residual Ince...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9360199/ https://www.ncbi.nlm.nih.gov/pubmed/35142053 http://dx.doi.org/10.1002/alz.12564 |
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author | Shah, Jay Gao, Fei Li, Baoxin Ghisays, Valentina Luo, Ji Chen, Yinghua Lee, Wendy Zhou, Yuxiang Benzinger, Tammie L.S. Reiman, Eric M. Chen, Kewei Su, Yi Wu, Teresa |
author_facet | Shah, Jay Gao, Fei Li, Baoxin Ghisays, Valentina Luo, Ji Chen, Yinghua Lee, Wendy Zhou, Yuxiang Benzinger, Tammie L.S. Reiman, Eric M. Chen, Kewei Su, Yi Wu, Teresa |
author_sort | Shah, Jay |
collection | PubMed |
description | INTRODUCTION: Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and quantitative analysis. We accordingly developed and validated a deep learning model as a harmonization strategy. METHOD: A Residual Inception Encoder‐Decoder Neural Network was developed to harmonize images between amyloid PET image pairs made with Pittsburgh Compound‐B and florbetapir tracers. The model was trained using a dataset with 92 subjects with 10‐fold cross validation and its generalizability was further examined using an independent external dataset of 46 subjects. RESULTS: Significantly stronger between‐tracer correlations (P < .001) were observed after harmonization for both global amyloid burden indices and voxel‐wise measurements in the training cohort and the external testing cohort. DISCUSSION: We proposed and validated a novel encoder‐decoder based deep model to harmonize amyloid PET imaging data from different tracers. Further investigation is ongoing to improve the model and apply to additional tracers. |
format | Online Article Text |
id | pubmed-9360199 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93601992023-04-07 Deep residual inception encoder‐decoder network for amyloid PET harmonization Shah, Jay Gao, Fei Li, Baoxin Ghisays, Valentina Luo, Ji Chen, Yinghua Lee, Wendy Zhou, Yuxiang Benzinger, Tammie L.S. Reiman, Eric M. Chen, Kewei Su, Yi Wu, Teresa Alzheimers Dement Featured Articles INTRODUCTION: Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and quantitative analysis. We accordingly developed and validated a deep learning model as a harmonization strategy. METHOD: A Residual Inception Encoder‐Decoder Neural Network was developed to harmonize images between amyloid PET image pairs made with Pittsburgh Compound‐B and florbetapir tracers. The model was trained using a dataset with 92 subjects with 10‐fold cross validation and its generalizability was further examined using an independent external dataset of 46 subjects. RESULTS: Significantly stronger between‐tracer correlations (P < .001) were observed after harmonization for both global amyloid burden indices and voxel‐wise measurements in the training cohort and the external testing cohort. DISCUSSION: We proposed and validated a novel encoder‐decoder based deep model to harmonize amyloid PET imaging data from different tracers. Further investigation is ongoing to improve the model and apply to additional tracers. John Wiley and Sons Inc. 2022-02-09 2022-12 /pmc/articles/PMC9360199/ /pubmed/35142053 http://dx.doi.org/10.1002/alz.12564 Text en © 2022 The Authors. Alzheimer's & Dementia published by Wiley Periodicals LLC on behalf of Alzheimer's Association https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Featured Articles Shah, Jay Gao, Fei Li, Baoxin Ghisays, Valentina Luo, Ji Chen, Yinghua Lee, Wendy Zhou, Yuxiang Benzinger, Tammie L.S. Reiman, Eric M. Chen, Kewei Su, Yi Wu, Teresa Deep residual inception encoder‐decoder network for amyloid PET harmonization |
title | Deep residual inception encoder‐decoder network for amyloid PET harmonization |
title_full | Deep residual inception encoder‐decoder network for amyloid PET harmonization |
title_fullStr | Deep residual inception encoder‐decoder network for amyloid PET harmonization |
title_full_unstemmed | Deep residual inception encoder‐decoder network for amyloid PET harmonization |
title_short | Deep residual inception encoder‐decoder network for amyloid PET harmonization |
title_sort | deep residual inception encoder‐decoder network for amyloid pet harmonization |
topic | Featured Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9360199/ https://www.ncbi.nlm.nih.gov/pubmed/35142053 http://dx.doi.org/10.1002/alz.12564 |
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