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Case report: evaluation of an open-source synthetic data platform for simulation studies

Simulation is a mainstay of comparative- and cost-effectiveness research when empirical data are not available. The Synthea platform, originally designed for generating realistically coded longitudinal health records for software testing, implements data generation models specified in publicly contr...

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Detalles Bibliográficos
Autores principales: Meeker, Daniella, Kallem, Crystal, Heras, Yan, Garcia, Stephanie, Thompson, Casey
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9360775/
https://www.ncbi.nlm.nih.gov/pubmed/35958672
http://dx.doi.org/10.1093/jamiaopen/ooac067
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author Meeker, Daniella
Kallem, Crystal
Heras, Yan
Garcia, Stephanie
Thompson, Casey
author_facet Meeker, Daniella
Kallem, Crystal
Heras, Yan
Garcia, Stephanie
Thompson, Casey
author_sort Meeker, Daniella
collection PubMed
description Simulation is a mainstay of comparative- and cost-effectiveness research when empirical data are not available. The Synthea platform, originally designed for generating realistically coded longitudinal health records for software testing, implements data generation models specified in publicly contributed modules representing patients’ life cycle and disease and treatment progression. We test the hypothesis that Synthea can be used for simulation studies that draw parameters from observational studies and randomized trials. We benchmarked the results and assessed the effort required to create a Synthea module that replicates a recently published cost-effectiveness simulation comparing levofloxacin prophylaxis to usual care for leukemia. A module was iteratively developed using published parameters from the original study; we replicated the initial conditions and simulation endpoints of demographics, health events, costs, and mortality. We compare Synthea’s Generic Module Framework to platforms designed for simulation and show that Synthea can be used, with modifications, for some types of simulation studies.
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spelling pubmed-93607752022-08-10 Case report: evaluation of an open-source synthetic data platform for simulation studies Meeker, Daniella Kallem, Crystal Heras, Yan Garcia, Stephanie Thompson, Casey JAMIA Open Case Report Simulation is a mainstay of comparative- and cost-effectiveness research when empirical data are not available. The Synthea platform, originally designed for generating realistically coded longitudinal health records for software testing, implements data generation models specified in publicly contributed modules representing patients’ life cycle and disease and treatment progression. We test the hypothesis that Synthea can be used for simulation studies that draw parameters from observational studies and randomized trials. We benchmarked the results and assessed the effort required to create a Synthea module that replicates a recently published cost-effectiveness simulation comparing levofloxacin prophylaxis to usual care for leukemia. A module was iteratively developed using published parameters from the original study; we replicated the initial conditions and simulation endpoints of demographics, health events, costs, and mortality. We compare Synthea’s Generic Module Framework to platforms designed for simulation and show that Synthea can be used, with modifications, for some types of simulation studies. Oxford University Press 2022-08-08 /pmc/articles/PMC9360775/ /pubmed/35958672 http://dx.doi.org/10.1093/jamiaopen/ooac067 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Case Report
Meeker, Daniella
Kallem, Crystal
Heras, Yan
Garcia, Stephanie
Thompson, Casey
Case report: evaluation of an open-source synthetic data platform for simulation studies
title Case report: evaluation of an open-source synthetic data platform for simulation studies
title_full Case report: evaluation of an open-source synthetic data platform for simulation studies
title_fullStr Case report: evaluation of an open-source synthetic data platform for simulation studies
title_full_unstemmed Case report: evaluation of an open-source synthetic data platform for simulation studies
title_short Case report: evaluation of an open-source synthetic data platform for simulation studies
title_sort case report: evaluation of an open-source synthetic data platform for simulation studies
topic Case Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9360775/
https://www.ncbi.nlm.nih.gov/pubmed/35958672
http://dx.doi.org/10.1093/jamiaopen/ooac067
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