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Automatic segmentation of COVID-19 from computed tomography images using modified U-Net model-based majority voting approach
The coronavirus disease (COVID-19) is an important public health problem that has spread rapidly around the world and has caused the death of millions of people. Therefore, studies to determine the factors affecting the disease, to perform preventive actions and to find an effective treatment are at...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer London
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9362439/ https://www.ncbi.nlm.nih.gov/pubmed/35968248 http://dx.doi.org/10.1007/s00521-022-07653-z |
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author | Uçar, Murat |
author_facet | Uçar, Murat |
author_sort | Uçar, Murat |
collection | PubMed |
description | The coronavirus disease (COVID-19) is an important public health problem that has spread rapidly around the world and has caused the death of millions of people. Therefore, studies to determine the factors affecting the disease, to perform preventive actions and to find an effective treatment are at the forefront. In this study, a deep learning and segmentation-based approach is proposed for the detection of COVID-19 disease from computed tomography images. The proposed model was created by modifying the encoder part of the U-Net segmentation model. In the encoder part, VGG16, ResNet101, DenseNet121, InceptionV3 and EfficientNetB5 deep learning models were used, respectively. Then, the results obtained with each modified U-Net model were combined with the majority vote principle and a final result was reached. As a result of the experimental tests, the proposed model obtained 85.03% Dice score, 89.13% sensitivity and 99.38% specificity on the COVID-19 segmentation test dataset. The results obtained in the study show that the proposed model will especially benefit clinicians in terms of time and cost. |
format | Online Article Text |
id | pubmed-9362439 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer London |
record_format | MEDLINE/PubMed |
spelling | pubmed-93624392022-08-10 Automatic segmentation of COVID-19 from computed tomography images using modified U-Net model-based majority voting approach Uçar, Murat Neural Comput Appl Original Article The coronavirus disease (COVID-19) is an important public health problem that has spread rapidly around the world and has caused the death of millions of people. Therefore, studies to determine the factors affecting the disease, to perform preventive actions and to find an effective treatment are at the forefront. In this study, a deep learning and segmentation-based approach is proposed for the detection of COVID-19 disease from computed tomography images. The proposed model was created by modifying the encoder part of the U-Net segmentation model. In the encoder part, VGG16, ResNet101, DenseNet121, InceptionV3 and EfficientNetB5 deep learning models were used, respectively. Then, the results obtained with each modified U-Net model were combined with the majority vote principle and a final result was reached. As a result of the experimental tests, the proposed model obtained 85.03% Dice score, 89.13% sensitivity and 99.38% specificity on the COVID-19 segmentation test dataset. The results obtained in the study show that the proposed model will especially benefit clinicians in terms of time and cost. Springer London 2022-08-06 2022 /pmc/articles/PMC9362439/ /pubmed/35968248 http://dx.doi.org/10.1007/s00521-022-07653-z Text en © The Author(s), under exclusive licence to Springer-Verlag London Ltd., part of Springer Nature 2022, Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Original Article Uçar, Murat Automatic segmentation of COVID-19 from computed tomography images using modified U-Net model-based majority voting approach |
title | Automatic segmentation of COVID-19 from computed tomography images using modified U-Net model-based majority voting approach |
title_full | Automatic segmentation of COVID-19 from computed tomography images using modified U-Net model-based majority voting approach |
title_fullStr | Automatic segmentation of COVID-19 from computed tomography images using modified U-Net model-based majority voting approach |
title_full_unstemmed | Automatic segmentation of COVID-19 from computed tomography images using modified U-Net model-based majority voting approach |
title_short | Automatic segmentation of COVID-19 from computed tomography images using modified U-Net model-based majority voting approach |
title_sort | automatic segmentation of covid-19 from computed tomography images using modified u-net model-based majority voting approach |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9362439/ https://www.ncbi.nlm.nih.gov/pubmed/35968248 http://dx.doi.org/10.1007/s00521-022-07653-z |
work_keys_str_mv | AT ucarmurat automaticsegmentationofcovid19fromcomputedtomographyimagesusingmodifiedunetmodelbasedmajorityvotingapproach |