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Free-energy differences of OPC-water and SPC/HW-heavy-water models using the Bennett acceptance ratio
Surface tension, vapor density of OPC-water and SPC/HW-heavy-water models have been estimated at low temperatures using the scaled model. The free-energy difference, - [Formula: see text] , of n-molecules and (n-1)-molecules plus a free probe has been calculated using the Bennett acceptance ratio wi...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9364108/ https://www.ncbi.nlm.nih.gov/pubmed/35965979 http://dx.doi.org/10.1016/j.heliyon.2022.e10000 |
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author | Khasawinah, Khetam Alzoubi, Zain Obeidat, Abdalla |
author_facet | Khasawinah, Khetam Alzoubi, Zain Obeidat, Abdalla |
author_sort | Khasawinah, Khetam |
collection | PubMed |
description | Surface tension, vapor density of OPC-water and SPC/HW-heavy-water models have been estimated at low temperatures using the scaled model. The free-energy difference, - [Formula: see text] , of n-molecules and (n-1)-molecules plus a free probe has been calculated using the Bennett acceptance ratio with the aid of Monte-Carlo simulations. Our results show that the relation between the free-energy difference divided by [Formula: see text] and the number of molecules to the power minus one-third is linear for [Formula: see text]. Consequently, the surface tension can be extracted from the straight line slope, whereas the vapor density can be extracted from the intercept, which is proportional to the logarithmic ratio of liquid density to that of vapor density. By scaling the free-energy differences, for at least three different temperatures, to [Formula: see text] we estimated the critical temperature and hence the surface tension and the vapor density at a wide range of temperatures. The free-energy differences have been calculated at 240K, 260K, and 280K for OPC-water, and at 260K, 280K, and 300K for the SPC/HW-heavy water model. |
format | Online Article Text |
id | pubmed-9364108 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-93641082022-08-11 Free-energy differences of OPC-water and SPC/HW-heavy-water models using the Bennett acceptance ratio Khasawinah, Khetam Alzoubi, Zain Obeidat, Abdalla Heliyon Research Article Surface tension, vapor density of OPC-water and SPC/HW-heavy-water models have been estimated at low temperatures using the scaled model. The free-energy difference, - [Formula: see text] , of n-molecules and (n-1)-molecules plus a free probe has been calculated using the Bennett acceptance ratio with the aid of Monte-Carlo simulations. Our results show that the relation between the free-energy difference divided by [Formula: see text] and the number of molecules to the power minus one-third is linear for [Formula: see text]. Consequently, the surface tension can be extracted from the straight line slope, whereas the vapor density can be extracted from the intercept, which is proportional to the logarithmic ratio of liquid density to that of vapor density. By scaling the free-energy differences, for at least three different temperatures, to [Formula: see text] we estimated the critical temperature and hence the surface tension and the vapor density at a wide range of temperatures. The free-energy differences have been calculated at 240K, 260K, and 280K for OPC-water, and at 260K, 280K, and 300K for the SPC/HW-heavy water model. Elsevier 2022-07-20 /pmc/articles/PMC9364108/ /pubmed/35965979 http://dx.doi.org/10.1016/j.heliyon.2022.e10000 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Khasawinah, Khetam Alzoubi, Zain Obeidat, Abdalla Free-energy differences of OPC-water and SPC/HW-heavy-water models using the Bennett acceptance ratio |
title | Free-energy differences of OPC-water and SPC/HW-heavy-water models using the Bennett acceptance ratio |
title_full | Free-energy differences of OPC-water and SPC/HW-heavy-water models using the Bennett acceptance ratio |
title_fullStr | Free-energy differences of OPC-water and SPC/HW-heavy-water models using the Bennett acceptance ratio |
title_full_unstemmed | Free-energy differences of OPC-water and SPC/HW-heavy-water models using the Bennett acceptance ratio |
title_short | Free-energy differences of OPC-water and SPC/HW-heavy-water models using the Bennett acceptance ratio |
title_sort | free-energy differences of opc-water and spc/hw-heavy-water models using the bennett acceptance ratio |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9364108/ https://www.ncbi.nlm.nih.gov/pubmed/35965979 http://dx.doi.org/10.1016/j.heliyon.2022.e10000 |
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