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Cancer-Net SCa: tailored deep neural network designs for detection of skin cancer from dermoscopy images

BACKGROUND: Skin cancer continues to be the most frequently diagnosed form of cancer in the U.S., with not only significant effects on health and well-being but also significant economic costs associated with treatment. A crucial step to the treatment and management of skin cancer is effective early...

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Autores principales: Lee, James Ren Hou, Pavlova, Maya, Famouri, Mahmoud, Wong, Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9364616/
https://www.ncbi.nlm.nih.gov/pubmed/35945505
http://dx.doi.org/10.1186/s12880-022-00871-w
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author Lee, James Ren Hou
Pavlova, Maya
Famouri, Mahmoud
Wong, Alexander
author_facet Lee, James Ren Hou
Pavlova, Maya
Famouri, Mahmoud
Wong, Alexander
author_sort Lee, James Ren Hou
collection PubMed
description BACKGROUND: Skin cancer continues to be the most frequently diagnosed form of cancer in the U.S., with not only significant effects on health and well-being but also significant economic costs associated with treatment. A crucial step to the treatment and management of skin cancer is effective early detection with key screening approaches such as dermoscopy examinations, leading to stronger recovery prognoses. Motivated by the advances of deep learning and inspired by the open source initiatives in the research community, in this study we introduce Cancer-Net SCa, a suite of deep neural network designs tailored for the detection of skin cancer from dermoscopy images that is open source and available to the general public. To the best of the authors’ knowledge, Cancer-Net SCa comprises the first machine-driven design of deep neural network architectures tailored specifically for skin cancer detection, one of which leverages attention condensers for an efficient self-attention design. RESULTS: We investigate and audit the behaviour of Cancer-Net SCa in a responsible and transparent manner through explainability-driven performance validation. All the proposed designs achieved improved accuracy when compared to the ResNet-50 architecture while also achieving significantly reduced architectural and computational complexity. In addition, when evaluating the decision making process of the networks, it can be seen that diagnostically relevant critical factors are leveraged rather than irrelevant visual indicators and imaging artifacts. CONCLUSION: The proposed Cancer-Net SCa designs achieve strong skin cancer detection performance on the International Skin Imaging Collaboration (ISIC) dataset, while providing a strong balance between computation and architectural efficiency and accuracy. While Cancer-Net SCa is not a production-ready screening solution, the hope is that the release of Cancer-Net SCa in open source, open access form will encourage researchers, clinicians, and citizen data scientists alike to leverage and build upon them.
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spelling pubmed-93646162022-08-11 Cancer-Net SCa: tailored deep neural network designs for detection of skin cancer from dermoscopy images Lee, James Ren Hou Pavlova, Maya Famouri, Mahmoud Wong, Alexander BMC Med Imaging Research BACKGROUND: Skin cancer continues to be the most frequently diagnosed form of cancer in the U.S., with not only significant effects on health and well-being but also significant economic costs associated with treatment. A crucial step to the treatment and management of skin cancer is effective early detection with key screening approaches such as dermoscopy examinations, leading to stronger recovery prognoses. Motivated by the advances of deep learning and inspired by the open source initiatives in the research community, in this study we introduce Cancer-Net SCa, a suite of deep neural network designs tailored for the detection of skin cancer from dermoscopy images that is open source and available to the general public. To the best of the authors’ knowledge, Cancer-Net SCa comprises the first machine-driven design of deep neural network architectures tailored specifically for skin cancer detection, one of which leverages attention condensers for an efficient self-attention design. RESULTS: We investigate and audit the behaviour of Cancer-Net SCa in a responsible and transparent manner through explainability-driven performance validation. All the proposed designs achieved improved accuracy when compared to the ResNet-50 architecture while also achieving significantly reduced architectural and computational complexity. In addition, when evaluating the decision making process of the networks, it can be seen that diagnostically relevant critical factors are leveraged rather than irrelevant visual indicators and imaging artifacts. CONCLUSION: The proposed Cancer-Net SCa designs achieve strong skin cancer detection performance on the International Skin Imaging Collaboration (ISIC) dataset, while providing a strong balance between computation and architectural efficiency and accuracy. While Cancer-Net SCa is not a production-ready screening solution, the hope is that the release of Cancer-Net SCa in open source, open access form will encourage researchers, clinicians, and citizen data scientists alike to leverage and build upon them. BioMed Central 2022-08-09 /pmc/articles/PMC9364616/ /pubmed/35945505 http://dx.doi.org/10.1186/s12880-022-00871-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Lee, James Ren Hou
Pavlova, Maya
Famouri, Mahmoud
Wong, Alexander
Cancer-Net SCa: tailored deep neural network designs for detection of skin cancer from dermoscopy images
title Cancer-Net SCa: tailored deep neural network designs for detection of skin cancer from dermoscopy images
title_full Cancer-Net SCa: tailored deep neural network designs for detection of skin cancer from dermoscopy images
title_fullStr Cancer-Net SCa: tailored deep neural network designs for detection of skin cancer from dermoscopy images
title_full_unstemmed Cancer-Net SCa: tailored deep neural network designs for detection of skin cancer from dermoscopy images
title_short Cancer-Net SCa: tailored deep neural network designs for detection of skin cancer from dermoscopy images
title_sort cancer-net sca: tailored deep neural network designs for detection of skin cancer from dermoscopy images
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9364616/
https://www.ncbi.nlm.nih.gov/pubmed/35945505
http://dx.doi.org/10.1186/s12880-022-00871-w
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