Stardust: improving spatial transcriptomics data analysis through space-aware modularity optimization-based clustering

BACKGROUND: Spatial transcriptomics (ST) combines stained tissue images with spatially resolved high-throughput RNA sequencing. The spatial transcriptomic analysis includes challenging tasks like clustering, where a partition among data points (spots) is defined by means of a similarity measure. Imp...

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Detalles Bibliográficos
Autores principales: Avesani, Simone, Viesi, Eva, Alessandrì, Luca, Motterle, Giovanni, Bonnici, Vincenzo, Beccuti, Marco, Calogero, Raffaele, Giugno, Rosalba
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9364686/
https://www.ncbi.nlm.nih.gov/pubmed/35946989
http://dx.doi.org/10.1093/gigascience/giac075

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9364686/
https://www.ncbi.nlm.nih.gov/pubmed/35946989
http://dx.doi.org/10.1093/gigascience/giac075

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