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Stardust: improving spatial transcriptomics data analysis through space-aware modularity optimization-based clustering
BACKGROUND: Spatial transcriptomics (ST) combines stained tissue images with spatially resolved high-throughput RNA sequencing. The spatial transcriptomic analysis includes challenging tasks like clustering, where a partition among data points (spots) is defined by means of a similarity measure. Imp...
Autores principales: | Avesani, Simone, Viesi, Eva, Alessandrì, Luca, Motterle, Giovanni, Bonnici, Vincenzo, Beccuti, Marco, Calogero, Raffaele, Giugno, Rosalba |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9364686/ https://www.ncbi.nlm.nih.gov/pubmed/35946989 http://dx.doi.org/10.1093/gigascience/giac075 |
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