Cargando…
Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma
Objective: This study was undertaken to explore the expression and prognostic value of GINS family in human sarcoma, as well as the association between the expression levels of the GINS family and sarcoma immune infiltration. Results: We discovered that the mRNA expression levels of GINS1, GINS2, GI...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9365567/ https://www.ncbi.nlm.nih.gov/pubmed/35896011 http://dx.doi.org/10.18632/aging.204191 |
_version_ | 1784765366912679936 |
---|---|
author | Zhang, Kexin Zhou, Jian Wu, Tong Tian, Qunyan Liu, Tang Wang, Wanchun Zhong, Hua Chen, Ziyuan Xiao, Xungang Wu, Gen |
author_facet | Zhang, Kexin Zhou, Jian Wu, Tong Tian, Qunyan Liu, Tang Wang, Wanchun Zhong, Hua Chen, Ziyuan Xiao, Xungang Wu, Gen |
author_sort | Zhang, Kexin |
collection | PubMed |
description | Objective: This study was undertaken to explore the expression and prognostic value of GINS family in human sarcoma, as well as the association between the expression levels of the GINS family and sarcoma immune infiltration. Results: We discovered that the mRNA expression levels of GINS1, GINS2, GINS3, and GINS4 were all higher in the majority of tumor tissues than in normal samples, of course, including sarcoma. Through the CCLE, all the four members expression were observed in high levels in sarcoma cell lines. In Gene Expression Profiling Analysis (GEPIA) and Kaplan-Meier Plotter, our results indicated that the poor overall survival (OS), disease-free survival (DFS) and relapse free survival (RFS) were tightly associated with the increased expression of GINS genes. In TIMER database, we found that highly expressed GINS was significantly correlated with the low infiltration level of CD4+ T cell and macrophage. Conclusions: The four GINS family members were all the prognostic biomarkers for the prognosis of human sarcoma and can reduce the level of immune cell infiltration in the sarcoma microenvironment. Methods: In terms of the expression levels of mRNA for GINS family members, a particular contrast in various cancers, especially human sarcoma, was conducted through ONCOMINE and GEPIA and CCLE databases. Kaplan-Meier Plotter was used to identify the prognostic value of GINS family in sarcoma. The relationship between the expression level of GINS and the infiltration of immune cells was analyzed in TIMER database. |
format | Online Article Text |
id | pubmed-9365567 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-93655672022-08-11 Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma Zhang, Kexin Zhou, Jian Wu, Tong Tian, Qunyan Liu, Tang Wang, Wanchun Zhong, Hua Chen, Ziyuan Xiao, Xungang Wu, Gen Aging (Albany NY) Research Paper Objective: This study was undertaken to explore the expression and prognostic value of GINS family in human sarcoma, as well as the association between the expression levels of the GINS family and sarcoma immune infiltration. Results: We discovered that the mRNA expression levels of GINS1, GINS2, GINS3, and GINS4 were all higher in the majority of tumor tissues than in normal samples, of course, including sarcoma. Through the CCLE, all the four members expression were observed in high levels in sarcoma cell lines. In Gene Expression Profiling Analysis (GEPIA) and Kaplan-Meier Plotter, our results indicated that the poor overall survival (OS), disease-free survival (DFS) and relapse free survival (RFS) were tightly associated with the increased expression of GINS genes. In TIMER database, we found that highly expressed GINS was significantly correlated with the low infiltration level of CD4+ T cell and macrophage. Conclusions: The four GINS family members were all the prognostic biomarkers for the prognosis of human sarcoma and can reduce the level of immune cell infiltration in the sarcoma microenvironment. Methods: In terms of the expression levels of mRNA for GINS family members, a particular contrast in various cancers, especially human sarcoma, was conducted through ONCOMINE and GEPIA and CCLE databases. Kaplan-Meier Plotter was used to identify the prognostic value of GINS family in sarcoma. The relationship between the expression level of GINS and the infiltration of immune cells was analyzed in TIMER database. Impact Journals 2022-07-27 /pmc/articles/PMC9365567/ /pubmed/35896011 http://dx.doi.org/10.18632/aging.204191 Text en Copyright: © 2022 Zhang et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Zhang, Kexin Zhou, Jian Wu, Tong Tian, Qunyan Liu, Tang Wang, Wanchun Zhong, Hua Chen, Ziyuan Xiao, Xungang Wu, Gen Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma |
title | Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma |
title_full | Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma |
title_fullStr | Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma |
title_full_unstemmed | Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma |
title_short | Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma |
title_sort | combined analysis of expression, prognosis and immune infiltration of gins family genes in human sarcoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9365567/ https://www.ncbi.nlm.nih.gov/pubmed/35896011 http://dx.doi.org/10.18632/aging.204191 |
work_keys_str_mv | AT zhangkexin combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma AT zhoujian combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma AT wutong combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma AT tianqunyan combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma AT liutang combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma AT wangwanchun combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma AT zhonghua combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma AT chenziyuan combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma AT xiaoxungang combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma AT wugen combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma |