Cargando…

Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma

Objective: This study was undertaken to explore the expression and prognostic value of GINS family in human sarcoma, as well as the association between the expression levels of the GINS family and sarcoma immune infiltration. Results: We discovered that the mRNA expression levels of GINS1, GINS2, GI...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Kexin, Zhou, Jian, Wu, Tong, Tian, Qunyan, Liu, Tang, Wang, Wanchun, Zhong, Hua, Chen, Ziyuan, Xiao, Xungang, Wu, Gen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9365567/
https://www.ncbi.nlm.nih.gov/pubmed/35896011
http://dx.doi.org/10.18632/aging.204191
_version_ 1784765366912679936
author Zhang, Kexin
Zhou, Jian
Wu, Tong
Tian, Qunyan
Liu, Tang
Wang, Wanchun
Zhong, Hua
Chen, Ziyuan
Xiao, Xungang
Wu, Gen
author_facet Zhang, Kexin
Zhou, Jian
Wu, Tong
Tian, Qunyan
Liu, Tang
Wang, Wanchun
Zhong, Hua
Chen, Ziyuan
Xiao, Xungang
Wu, Gen
author_sort Zhang, Kexin
collection PubMed
description Objective: This study was undertaken to explore the expression and prognostic value of GINS family in human sarcoma, as well as the association between the expression levels of the GINS family and sarcoma immune infiltration. Results: We discovered that the mRNA expression levels of GINS1, GINS2, GINS3, and GINS4 were all higher in the majority of tumor tissues than in normal samples, of course, including sarcoma. Through the CCLE, all the four members expression were observed in high levels in sarcoma cell lines. In Gene Expression Profiling Analysis (GEPIA) and Kaplan-Meier Plotter, our results indicated that the poor overall survival (OS), disease-free survival (DFS) and relapse free survival (RFS) were tightly associated with the increased expression of GINS genes. In TIMER database, we found that highly expressed GINS was significantly correlated with the low infiltration level of CD4+ T cell and macrophage. Conclusions: The four GINS family members were all the prognostic biomarkers for the prognosis of human sarcoma and can reduce the level of immune cell infiltration in the sarcoma microenvironment. Methods: In terms of the expression levels of mRNA for GINS family members, a particular contrast in various cancers, especially human sarcoma, was conducted through ONCOMINE and GEPIA and CCLE databases. Kaplan-Meier Plotter was used to identify the prognostic value of GINS family in sarcoma. The relationship between the expression level of GINS and the infiltration of immune cells was analyzed in TIMER database.
format Online
Article
Text
id pubmed-9365567
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Impact Journals
record_format MEDLINE/PubMed
spelling pubmed-93655672022-08-11 Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma Zhang, Kexin Zhou, Jian Wu, Tong Tian, Qunyan Liu, Tang Wang, Wanchun Zhong, Hua Chen, Ziyuan Xiao, Xungang Wu, Gen Aging (Albany NY) Research Paper Objective: This study was undertaken to explore the expression and prognostic value of GINS family in human sarcoma, as well as the association between the expression levels of the GINS family and sarcoma immune infiltration. Results: We discovered that the mRNA expression levels of GINS1, GINS2, GINS3, and GINS4 were all higher in the majority of tumor tissues than in normal samples, of course, including sarcoma. Through the CCLE, all the four members expression were observed in high levels in sarcoma cell lines. In Gene Expression Profiling Analysis (GEPIA) and Kaplan-Meier Plotter, our results indicated that the poor overall survival (OS), disease-free survival (DFS) and relapse free survival (RFS) were tightly associated with the increased expression of GINS genes. In TIMER database, we found that highly expressed GINS was significantly correlated with the low infiltration level of CD4+ T cell and macrophage. Conclusions: The four GINS family members were all the prognostic biomarkers for the prognosis of human sarcoma and can reduce the level of immune cell infiltration in the sarcoma microenvironment. Methods: In terms of the expression levels of mRNA for GINS family members, a particular contrast in various cancers, especially human sarcoma, was conducted through ONCOMINE and GEPIA and CCLE databases. Kaplan-Meier Plotter was used to identify the prognostic value of GINS family in sarcoma. The relationship between the expression level of GINS and the infiltration of immune cells was analyzed in TIMER database. Impact Journals 2022-07-27 /pmc/articles/PMC9365567/ /pubmed/35896011 http://dx.doi.org/10.18632/aging.204191 Text en Copyright: © 2022 Zhang et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Zhang, Kexin
Zhou, Jian
Wu, Tong
Tian, Qunyan
Liu, Tang
Wang, Wanchun
Zhong, Hua
Chen, Ziyuan
Xiao, Xungang
Wu, Gen
Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma
title Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma
title_full Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma
title_fullStr Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma
title_full_unstemmed Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma
title_short Combined analysis of expression, prognosis and immune infiltration of GINS family genes in human sarcoma
title_sort combined analysis of expression, prognosis and immune infiltration of gins family genes in human sarcoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9365567/
https://www.ncbi.nlm.nih.gov/pubmed/35896011
http://dx.doi.org/10.18632/aging.204191
work_keys_str_mv AT zhangkexin combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma
AT zhoujian combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma
AT wutong combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma
AT tianqunyan combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma
AT liutang combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma
AT wangwanchun combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma
AT zhonghua combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma
AT chenziyuan combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma
AT xiaoxungang combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma
AT wugen combinedanalysisofexpressionprognosisandimmuneinfiltrationofginsfamilygenesinhumansarcoma