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Identification and characterization of four immune-related signatures in keloid
A keloid is a fibroproliferative disorder of unknown etiopathogenesis that requires ill-defined treatment. Existing evidence indicates that the immune system plays an important role in the occurrence and development of keloid. However, there is still a lack of research on the immune-related signatur...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9365668/ https://www.ncbi.nlm.nih.gov/pubmed/35967426 http://dx.doi.org/10.3389/fimmu.2022.942446 |
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author | Wang, Xiaoxiang Liang, Bo Li, Jiehua Pi, Xiaobing Zhang, Peng Zhou, Xinzhu Chen, Xiaodong Zhou, Sitong Yang, Ronghua |
author_facet | Wang, Xiaoxiang Liang, Bo Li, Jiehua Pi, Xiaobing Zhang, Peng Zhou, Xinzhu Chen, Xiaodong Zhou, Sitong Yang, Ronghua |
author_sort | Wang, Xiaoxiang |
collection | PubMed |
description | A keloid is a fibroproliferative disorder of unknown etiopathogenesis that requires ill-defined treatment. Existing evidence indicates that the immune system plays an important role in the occurrence and development of keloid. However, there is still a lack of research on the immune-related signatures of keloid. Here we identified immune-related signatures in keloid and explored their pathological mechanisms. Transcriptomic datasets (GSE7890, GSE92566, and GSE44270) of keloid and normal skin tissues were obtained from the Gene Expression Omnibus database. The overlap of differentially expressed genes and immune-related genes was considered as differentially expressed immune-related genes (DEIGs). Functional analysis, expression, and distribution were applied to explore the function and characteristics of DEIGs, and the expression of these DEIGs in keloid and normal skin tissues was verified by immunohistochemistry. Finally, we conducted interactive network analysis and immune infiltration analysis to determine the therapeutic potential and immune correlation. We identified four DEIGs (LGR5, PTN, JAG1, and DKK1). In these datasets, only GSE7890 met the screening criteria. In the GSE7890 dataset, DKK1 and PTN were downregulated in keloid, whereas JAG1 and LGR5 were upregulated in keloid. In addition, we obtained the same conclusion through immunohistochemistry. Functional analysis indicated that these four DEIGs were mainly involved in stem cell, cell cycle, UV response, and therapy resistance. Through interactive network analysis, we found that these DEIGs were associated with drugs currently used to treat keloid, such as hydrocortisone, androstanolone, irinotecan, oxaliplatin, BHQ-880, and lecoleucovorin. Finally, many immune cells, including CD8(+) T cells, resting memory CD4(+) T cells, and M1 macrophages, were obtained by immune infiltration analysis. In conclusion, we identified four immune signaling molecules associated with keloid (LGR5, PTN, JAG1, and DKK1). These immune-related signaling molecules may be important modules in the pathogenesis of keloid. Additionally, we developed novel therapeutic targets for the treatment of this challenging disease. |
format | Online Article Text |
id | pubmed-9365668 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93656682022-08-12 Identification and characterization of four immune-related signatures in keloid Wang, Xiaoxiang Liang, Bo Li, Jiehua Pi, Xiaobing Zhang, Peng Zhou, Xinzhu Chen, Xiaodong Zhou, Sitong Yang, Ronghua Front Immunol Immunology A keloid is a fibroproliferative disorder of unknown etiopathogenesis that requires ill-defined treatment. Existing evidence indicates that the immune system plays an important role in the occurrence and development of keloid. However, there is still a lack of research on the immune-related signatures of keloid. Here we identified immune-related signatures in keloid and explored their pathological mechanisms. Transcriptomic datasets (GSE7890, GSE92566, and GSE44270) of keloid and normal skin tissues were obtained from the Gene Expression Omnibus database. The overlap of differentially expressed genes and immune-related genes was considered as differentially expressed immune-related genes (DEIGs). Functional analysis, expression, and distribution were applied to explore the function and characteristics of DEIGs, and the expression of these DEIGs in keloid and normal skin tissues was verified by immunohistochemistry. Finally, we conducted interactive network analysis and immune infiltration analysis to determine the therapeutic potential and immune correlation. We identified four DEIGs (LGR5, PTN, JAG1, and DKK1). In these datasets, only GSE7890 met the screening criteria. In the GSE7890 dataset, DKK1 and PTN were downregulated in keloid, whereas JAG1 and LGR5 were upregulated in keloid. In addition, we obtained the same conclusion through immunohistochemistry. Functional analysis indicated that these four DEIGs were mainly involved in stem cell, cell cycle, UV response, and therapy resistance. Through interactive network analysis, we found that these DEIGs were associated with drugs currently used to treat keloid, such as hydrocortisone, androstanolone, irinotecan, oxaliplatin, BHQ-880, and lecoleucovorin. Finally, many immune cells, including CD8(+) T cells, resting memory CD4(+) T cells, and M1 macrophages, were obtained by immune infiltration analysis. In conclusion, we identified four immune signaling molecules associated with keloid (LGR5, PTN, JAG1, and DKK1). These immune-related signaling molecules may be important modules in the pathogenesis of keloid. Additionally, we developed novel therapeutic targets for the treatment of this challenging disease. Frontiers Media S.A. 2022-07-27 /pmc/articles/PMC9365668/ /pubmed/35967426 http://dx.doi.org/10.3389/fimmu.2022.942446 Text en Copyright © 2022 Wang, Liang, Li, Pi, Zhang, Zhou, Chen, Zhou and Yang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Wang, Xiaoxiang Liang, Bo Li, Jiehua Pi, Xiaobing Zhang, Peng Zhou, Xinzhu Chen, Xiaodong Zhou, Sitong Yang, Ronghua Identification and characterization of four immune-related signatures in keloid |
title | Identification and characterization of four immune-related signatures in keloid |
title_full | Identification and characterization of four immune-related signatures in keloid |
title_fullStr | Identification and characterization of four immune-related signatures in keloid |
title_full_unstemmed | Identification and characterization of four immune-related signatures in keloid |
title_short | Identification and characterization of four immune-related signatures in keloid |
title_sort | identification and characterization of four immune-related signatures in keloid |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9365668/ https://www.ncbi.nlm.nih.gov/pubmed/35967426 http://dx.doi.org/10.3389/fimmu.2022.942446 |
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