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Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review

Discrimination of plant species, cultivars, and landraces is challenging because plants have high phenotypic and genotypic resemblance. Panax ginseng is commonly referred to as Korean ginseng, which contains saponins with high efficacy on cells, and has been reported to be worth billions in agroecon...

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Autores principales: Ying, Zheng, Awais, Muhammad, Akter, Reshmi, Xu, Fengjiao, Baik, Sul, Jung, Daehyo, Yang, Deok Chun, Kwak, Gi-Young, Wenying, You
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9366256/
https://www.ncbi.nlm.nih.gov/pubmed/35968150
http://dx.doi.org/10.3389/fpls.2022.903306
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author Ying, Zheng
Awais, Muhammad
Akter, Reshmi
Xu, Fengjiao
Baik, Sul
Jung, Daehyo
Yang, Deok Chun
Kwak, Gi-Young
Wenying, You
author_facet Ying, Zheng
Awais, Muhammad
Akter, Reshmi
Xu, Fengjiao
Baik, Sul
Jung, Daehyo
Yang, Deok Chun
Kwak, Gi-Young
Wenying, You
author_sort Ying, Zheng
collection PubMed
description Discrimination of plant species, cultivars, and landraces is challenging because plants have high phenotypic and genotypic resemblance. Panax ginseng is commonly referred to as Korean ginseng, which contains saponins with high efficacy on cells, and has been reported to be worth billions in agroeconomic value. Korean ginseng’s increasing global agroeconomic value includes additional species and cultivars that are not Korean ginseng but have physical characteristics close to it. This almost unidentifiable physical characteristic of Korean ginseng-like species is discriminated via molecular markers. Single nucleotide polymorphism (SNP), found across the plant species in abundance, is a valuable tool in the molecular mapping of genes and distinguishing a plant species from adulterants. Differentiating the composition of genes in species is quite evident, but the varieties and landraces have fewer differences in addition to single nucleotide mismatch. Especially in the exon region, there exist both favorable and adverse effects on species. With the aforementioned ideas in discriminating ginseng based on molecular markers, SNP has proven reliable and convenient, with advanced markers available. This article provides the simplest cost-effective guidelines for experiments in a traditional laboratory setting to get hands-on SNP marker analysis. Hence, the current review provides detailed up-to-date information about the discrimination of Panax ginseng exclusively based on SNP adding with a straightforward method explained which can be followed to perform the analysis.
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spelling pubmed-93662562022-08-12 Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review Ying, Zheng Awais, Muhammad Akter, Reshmi Xu, Fengjiao Baik, Sul Jung, Daehyo Yang, Deok Chun Kwak, Gi-Young Wenying, You Front Plant Sci Plant Science Discrimination of plant species, cultivars, and landraces is challenging because plants have high phenotypic and genotypic resemblance. Panax ginseng is commonly referred to as Korean ginseng, which contains saponins with high efficacy on cells, and has been reported to be worth billions in agroeconomic value. Korean ginseng’s increasing global agroeconomic value includes additional species and cultivars that are not Korean ginseng but have physical characteristics close to it. This almost unidentifiable physical characteristic of Korean ginseng-like species is discriminated via molecular markers. Single nucleotide polymorphism (SNP), found across the plant species in abundance, is a valuable tool in the molecular mapping of genes and distinguishing a plant species from adulterants. Differentiating the composition of genes in species is quite evident, but the varieties and landraces have fewer differences in addition to single nucleotide mismatch. Especially in the exon region, there exist both favorable and adverse effects on species. With the aforementioned ideas in discriminating ginseng based on molecular markers, SNP has proven reliable and convenient, with advanced markers available. This article provides the simplest cost-effective guidelines for experiments in a traditional laboratory setting to get hands-on SNP marker analysis. Hence, the current review provides detailed up-to-date information about the discrimination of Panax ginseng exclusively based on SNP adding with a straightforward method explained which can be followed to perform the analysis. Frontiers Media S.A. 2022-07-28 /pmc/articles/PMC9366256/ /pubmed/35968150 http://dx.doi.org/10.3389/fpls.2022.903306 Text en Copyright © 2022 Ying, Awais, Akter, Xu, Baik, Jung, Yang, Kwak and Wenying. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Ying, Zheng
Awais, Muhammad
Akter, Reshmi
Xu, Fengjiao
Baik, Sul
Jung, Daehyo
Yang, Deok Chun
Kwak, Gi-Young
Wenying, You
Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review
title Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review
title_full Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review
title_fullStr Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review
title_full_unstemmed Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review
title_short Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review
title_sort discrimination of panax ginseng from counterfeits using single nucleotide polymorphism: a focused review
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9366256/
https://www.ncbi.nlm.nih.gov/pubmed/35968150
http://dx.doi.org/10.3389/fpls.2022.903306
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