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Using Explainable Artificial Intelligence to Discover Interactions in an Ecological Model for Obesity

Ecological theories suggest that environmental, social, and individual factors interact to cause obesity. Yet, many analytic techniques, such as multilevel modeling, require manual specification of interacting factors, making them inept in their ability to search for interactions. This paper shows e...

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Detalles Bibliográficos
Autores principales: Allen, Ben, Lane, Morgan, Steeves, Elizabeth Anderson, Raynor, Hollie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9367834/
https://www.ncbi.nlm.nih.gov/pubmed/35954804
http://dx.doi.org/10.3390/ijerph19159447
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author Allen, Ben
Lane, Morgan
Steeves, Elizabeth Anderson
Raynor, Hollie
author_facet Allen, Ben
Lane, Morgan
Steeves, Elizabeth Anderson
Raynor, Hollie
author_sort Allen, Ben
collection PubMed
description Ecological theories suggest that environmental, social, and individual factors interact to cause obesity. Yet, many analytic techniques, such as multilevel modeling, require manual specification of interacting factors, making them inept in their ability to search for interactions. This paper shows evidence that an explainable artificial intelligence approach, commonly employed in genomics research, can address this problem. The method entails using random intersection trees to decode interactions learned by random forest models. Here, this approach is used to extract interactions between features of a multi-level environment from random forest models of waist-to-height ratios using 11,112 participants from the Adolescent Brain Cognitive Development study. This study shows that methods used to discover interactions between genes can also discover interacting features of the environment that impact obesity. This new approach to modeling ecosystems may help shine a spotlight on combinations of environmental features that are important to obesity, as well as other health outcomes.
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spelling pubmed-93678342022-08-12 Using Explainable Artificial Intelligence to Discover Interactions in an Ecological Model for Obesity Allen, Ben Lane, Morgan Steeves, Elizabeth Anderson Raynor, Hollie Int J Environ Res Public Health Article Ecological theories suggest that environmental, social, and individual factors interact to cause obesity. Yet, many analytic techniques, such as multilevel modeling, require manual specification of interacting factors, making them inept in their ability to search for interactions. This paper shows evidence that an explainable artificial intelligence approach, commonly employed in genomics research, can address this problem. The method entails using random intersection trees to decode interactions learned by random forest models. Here, this approach is used to extract interactions between features of a multi-level environment from random forest models of waist-to-height ratios using 11,112 participants from the Adolescent Brain Cognitive Development study. This study shows that methods used to discover interactions between genes can also discover interacting features of the environment that impact obesity. This new approach to modeling ecosystems may help shine a spotlight on combinations of environmental features that are important to obesity, as well as other health outcomes. MDPI 2022-08-02 /pmc/articles/PMC9367834/ /pubmed/35954804 http://dx.doi.org/10.3390/ijerph19159447 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Allen, Ben
Lane, Morgan
Steeves, Elizabeth Anderson
Raynor, Hollie
Using Explainable Artificial Intelligence to Discover Interactions in an Ecological Model for Obesity
title Using Explainable Artificial Intelligence to Discover Interactions in an Ecological Model for Obesity
title_full Using Explainable Artificial Intelligence to Discover Interactions in an Ecological Model for Obesity
title_fullStr Using Explainable Artificial Intelligence to Discover Interactions in an Ecological Model for Obesity
title_full_unstemmed Using Explainable Artificial Intelligence to Discover Interactions in an Ecological Model for Obesity
title_short Using Explainable Artificial Intelligence to Discover Interactions in an Ecological Model for Obesity
title_sort using explainable artificial intelligence to discover interactions in an ecological model for obesity
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9367834/
https://www.ncbi.nlm.nih.gov/pubmed/35954804
http://dx.doi.org/10.3390/ijerph19159447
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